Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 SLC25A1P4-201ENST00000567977 778 ntBASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC68Q9H2F9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 MIR718-201ENST00000390190 70 ntBASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 AC113410.3-201ENST00000623366 203 ntBASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC68Q9H2F9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 KRT8P32-201ENST00000512863 1461 ntBASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 MESTP1-201ENST00000404287 994 ntBASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 AC116562.2-201ENST00000507042 360 ntBASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 TMEM191A-211ENST00000637163 1067 ntBASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 AC020916.1-201ENST00000587762 1774 ntBASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC68Q9H2F9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CCDC68Q9H2F9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC68Q9H2F9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC68Q9H2F9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC68Q9H2F9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms