Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 KRT8P45-201ENST00000414328 1447 ntBASIC19.41■□□□□ 0.7
DDX47Q9H0S4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
DDX47Q9H0S4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 AC012313.1-201ENST00000593393 3059 ntBASIC19.4■□□□□ 0.7
DDX47Q9H0S4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.4■□□□□ 0.7
DDX47Q9H0S4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
DDX47Q9H0S4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.39■□□□□ 0.7
DDX47Q9H0S4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
DDX47Q9H0S4 AC138028.4-201ENST00000564984 1845 ntBASIC19.39■□□□□ 0.7
DDX47Q9H0S4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.39■□□□□ 0.7
DDX47Q9H0S4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 AC069152.1-201ENST00000438030 544 ntBASIC19.39■□□□□ 0.69
DDX47Q9H0S4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.39■□□□□ 0.69
DDX47Q9H0S4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 MYC-208ENST00000641036 567 ntBASIC19.39■□□□□ 0.69
DDX47Q9H0S4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 AC112777.1-201ENST00000540175 1423 ntBASIC19.39■□□□□ 0.69
DDX47Q9H0S4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 GNAS-203ENST00000306120 1878 ntBASIC19.39■□□□□ 0.69
DDX47Q9H0S4 REXO1L9P-201ENST00000604264 2108 ntBASIC19.39■□□□□ 0.69
DDX47Q9H0S4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
DDX47Q9H0S4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 AC139713.2-201ENST00000641328 2723 ntBASIC19.38■□□□□ 0.69
DDX47Q9H0S4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.38■□□□□ 0.69
DDX47Q9H0S4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms