Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AL512408.1-201ENST00000569378 2000 ntBASIC16.23■□□□□ 0.19
COL12A1Q99715 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL12A1Q99715 AC114341.1-201ENST00000618070 349 ntBASIC16.22■□□□□ 0.19
COL12A1Q99715 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL12A1Q99715 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.22■□□□□ 0.19
COL12A1Q99715 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL12A1Q99715 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL12A1Q99715 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL12A1Q99715 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.22■□□□□ 0.19
COL12A1Q99715 RNA5SP416-201ENST00000516838 111 ntBASIC16.22■□□□□ 0.19
COL12A1Q99715 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL12A1Q99715 AL162377.1-201ENST00000618844 1793 ntBASIC16.22■□□□□ 0.19
COL12A1Q99715 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL12A1Q99715 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
COL12A1Q99715 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.22■□□□□ 0.19
COL12A1Q99715 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL12A1Q99715 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL12A1Q99715 RBM17P3-201ENST00000417687 1192 ntBASIC16.22■□□□□ 0.19
COL12A1Q99715 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL12A1Q99715 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.22■□□□□ 0.19
COL12A1Q99715 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.22■□□□□ 0.19
COL12A1Q99715 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.22■□□□□ 0.19
COL12A1Q99715 AC027612.4-201ENST00000605371 583 ntBASIC16.22■□□□□ 0.19
COL12A1Q99715 AL008721.1-201ENST00000609964 604 ntBASIC16.22■□□□□ 0.19
COL12A1Q99715 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.22■□□□□ 0.19
COL12A1Q99715 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.22■□□□□ 0.19
COL12A1Q99715 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 LINC00565-201ENST00000562710 2331 ntBASIC16.21■□□□□ 0.19
COL12A1Q99715 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.21■□□□□ 0.19
COL12A1Q99715 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.21■□□□□ 0.19
COL12A1Q99715 AC021087.4-201ENST00000563761 564 ntBASIC16.21■□□□□ 0.19
COL12A1Q99715 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.21■□□□□ 0.19
COL12A1Q99715 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.21■□□□□ 0.19
COL12A1Q99715 Z92544.3-201ENST00000624747 417 ntBASIC16.21■□□□□ 0.19
COL12A1Q99715 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.21■□□□□ 0.19
COL12A1Q99715 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.21■□□□□ 0.19
COL12A1Q99715 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
COL12A1Q99715 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.21■□□□□ 0.19
COL12A1Q99715 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.21■□□□□ 0.19
COL12A1Q99715 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
COL12A1Q99715 MEIS3P1-201ENST00000495167 958 ntBASIC16.21■□□□□ 0.19
COL12A1Q99715 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.21■□□□□ 0.19
COL12A1Q99715 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.21■□□□□ 0.19
COL12A1Q99715 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.21■□□□□ 0.19
COL12A1Q99715 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.21■□□□□ 0.19
COL12A1Q99715 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.21■□□□□ 0.19
COL12A1Q99715 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL12A1Q99715 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COL12A1Q99715 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.21■□□□□ 0.18
COL12A1Q99715 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.21■□□□□ 0.18
COL12A1Q99715 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
COL12A1Q99715 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
COL12A1Q99715 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
COL12A1Q99715 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.2■□□□□ 0.18
COL12A1Q99715 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.2■□□□□ 0.18
COL12A1Q99715 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
COL12A1Q99715 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.2■□□□□ 0.18
COL12A1Q99715 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.2■□□□□ 0.18
COL12A1Q99715 AC011840.4-201ENST00000578471 627 ntBASIC16.2■□□□□ 0.18
COL12A1Q99715 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.2■□□□□ 0.18
COL12A1Q99715 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
COL12A1Q99715 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.2■□□□□ 0.18
COL12A1Q99715 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.2■□□□□ 0.18
COL12A1Q99715 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.2■□□□□ 0.18
COL12A1Q99715 AC005225.4-201ENST00000557330 545 ntBASIC16.2■□□□□ 0.18
COL12A1Q99715 MTDHP3-201ENST00000594186 672 ntBASIC16.2■□□□□ 0.18
COL12A1Q99715 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
COL12A1Q99715 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
COL12A1Q99715 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.2■□□□□ 0.18
COL12A1Q99715 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
COL12A1Q99715 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
COL12A1Q99715 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.2■□□□□ 0.18
COL12A1Q99715 AC254562.1-201ENST00000417586 456 ntBASIC16.2■□□□□ 0.18
COL12A1Q99715 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.2■□□□□ 0.18
COL12A1Q99715 AC092910.1-201ENST00000482027 1129 ntBASIC16.2■□□□□ 0.18
COL12A1Q99715 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.2■□□□□ 0.18
COL12A1Q99715 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.2■□□□□ 0.18
COL12A1Q99715 AC005498.2-205ENST00000593218 784 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms