Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MS4A4EQ96PG1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MS4A4EQ96PG1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.38■□□□□ 0.37
MS4A4EQ96PG1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.38■□□□□ 0.37
MS4A4EQ96PG1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.38■□□□□ 0.37
MS4A4EQ96PG1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.38■□□□□ 0.37
MS4A4EQ96PG1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MS4A4EQ96PG1 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.38■□□□□ 0.37
MS4A4EQ96PG1 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MS4A4EQ96PG1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
MS4A4EQ96PG1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
MS4A4EQ96PG1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 NEFHP1-201ENST00000412845 2629 ntBASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 AL353719.1-201ENST00000566847 864 ntBASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
MS4A4EQ96PG1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 AC036111.1-201ENST00000533973 1582 ntBASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 AC034236.2-201ENST00000606662 1610 ntBASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 AP000593.1-201ENST00000393668 712 ntBASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 AP003041.3-201ENST00000527151 707 ntBASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 AC116562.4-202ENST00000641738 218 ntBASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
MS4A4EQ96PG1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 AC092338.2-201ENST00000568827 1415 ntBASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 MYLKP1-201ENST00000509077 1580 ntBASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.35■□□□□ 0.37
MS4A4EQ96PG1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
MS4A4EQ96PG1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms