Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 KRT16P4-201ENST00000453883 522 ntBASIC19.84■□□□□ 0.77
CASD1Q96PB1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 AL353801.3-201ENST00000609898 542 ntBASIC19.84■□□□□ 0.77
CASD1Q96PB1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 AL163051.1-201ENST00000569214 1512 ntBASIC19.84■□□□□ 0.77
CASD1Q96PB1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.84■□□□□ 0.77
CASD1Q96PB1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASD1Q96PB1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASD1Q96PB1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CASD1Q96PB1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASD1Q96PB1 AFG3L1P-217ENST00000557444 2447 ntBASIC19.83■□□□□ 0.77
CASD1Q96PB1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASD1Q96PB1 NSUN5P1-202ENST00000421140 1535 ntBASIC19.83■□□□□ 0.77
CASD1Q96PB1 NSUN5P2-203ENST00000457352 1529 ntBASIC19.83■□□□□ 0.77
CASD1Q96PB1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CASD1Q96PB1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASD1Q96PB1 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASD1Q96PB1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CASD1Q96PB1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASD1Q96PB1 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.83■□□□□ 0.77
CASD1Q96PB1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CASD1Q96PB1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CASD1Q96PB1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
CASD1Q96PB1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CASD1Q96PB1 AP002469.2-201ENST00000531724 424 ntBASIC19.83■□□□□ 0.77
CASD1Q96PB1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.83■□□□□ 0.77
CASD1Q96PB1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CASD1Q96PB1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.83■□□□□ 0.77
CASD1Q96PB1 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CASD1Q96PB1 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.83■□□□□ 0.77
CASD1Q96PB1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CASD1Q96PB1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.83■□□□□ 0.76
CASD1Q96PB1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASD1Q96PB1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CASD1Q96PB1 AC007952.6-201ENST00000573168 2673 ntBASIC19.83■□□□□ 0.76
CASD1Q96PB1 AC003957.1-201ENST00000625108 2673 ntBASIC19.83■□□□□ 0.76
CASD1Q96PB1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASD1Q96PB1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CASD1Q96PB1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASD1Q96PB1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASD1Q96PB1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASD1Q96PB1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASD1Q96PB1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASD1Q96PB1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASD1Q96PB1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASD1Q96PB1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CASD1Q96PB1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASD1Q96PB1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASD1Q96PB1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.81■□□□□ 0.76
CASD1Q96PB1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASD1Q96PB1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASD1Q96PB1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CASD1Q96PB1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASD1Q96PB1 AP000593.1-201ENST00000393668 712 ntBASIC19.81■□□□□ 0.76
CASD1Q96PB1 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.81■□□□□ 0.76
CASD1Q96PB1 AC106795.1-205ENST00000512851 1056 ntBASIC19.81■□□□□ 0.76
CASD1Q96PB1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.81■□□□□ 0.76
CASD1Q96PB1 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.81■□□□□ 0.76
CASD1Q96PB1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.81■□□□□ 0.76
CASD1Q96PB1 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CASD1Q96PB1 AL121912.1-201ENST00000603683 238 ntBASIC19.81■□□□□ 0.76
CASD1Q96PB1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASD1Q96PB1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASD1Q96PB1 AC004263.2-201ENST00000617183 678 ntBASIC19.81■□□□□ 0.76
CASD1Q96PB1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
CASD1Q96PB1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms