Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2E2Q96LR5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBE2E2Q96LR5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 SEC1P-202ENST00000473944 940 ntBASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 AC009065.1-201ENST00000564055 1225 ntBASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 MIR3180-4-201ENST00000582223 153 ntBASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 Z98044.1-201ENST00000632503 1764 ntBASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 AC006333.2-201ENST00000607957 2099 ntBASIC14.42□□□□□ -0.1
UBE2E2Q96LR5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 AL357033.4-201ENST00000617703 1807 ntBASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 AP000593.1-201ENST00000393668 712 ntBASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 AL671277.2-201ENST00000458060 996 ntBASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 RASA4DP-201ENST00000460726 1199 ntBASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.41□□□□□ -0.1
UBE2E2Q96LR5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 KRT18P41-201ENST00000518924 1277 ntBASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UBE2E2Q96LR5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms