Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDF1Q96CC6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 AL390955.1-201ENST00000428694 934 ntBASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 SLC25A1P2-201ENST00000430693 912 ntBASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 MIR4497-201ENST00000583208 89 ntBASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RHBDF1Q96CC6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 AL353719.1-201ENST00000566847 864 ntBASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 MYLKP1-201ENST00000509077 1580 ntBASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RHBDF1Q96CC6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 MIR1238-201ENST00000408483 83 ntBASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 TSPY17P-201ENST00000450329 467 ntBASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 MIR3180-5-201ENST00000583743 153 ntBASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 AL354751.1-201ENST00000412768 1863 ntBASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 AL390961.4-201ENST00000623958 2535 ntBASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RHBDF1Q96CC6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.1■□□□□ 0.49
RHBDF1Q96CC6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
RHBDF1Q96CC6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDF1Q96CC6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDF1Q96CC6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDF1Q96CC6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDF1Q96CC6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RHBDF1Q96CC6 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms