Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF138Q8WVD3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RNF138Q8WVD3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.8■□□□□ 0.28
RNF138Q8WVD3 AL671277.2-201ENST00000458060 996 ntBASIC16.8■□□□□ 0.28
RNF138Q8WVD3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF138Q8WVD3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF138Q8WVD3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF138Q8WVD3 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF138Q8WVD3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF138Q8WVD3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF138Q8WVD3 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF138Q8WVD3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RNF138Q8WVD3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 MIR1224-201ENST00000408193 85 ntBASIC16.79■□□□□ 0.28
RNF138Q8WVD3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 KRT89P-201ENST00000620027 1478 ntBASIC16.79■□□□□ 0.28
RNF138Q8WVD3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.79■□□□□ 0.28
RNF138Q8WVD3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 AL024508.2-201ENST00000607749 1894 ntBASIC16.78■□□□□ 0.28
RNF138Q8WVD3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 MIR662-201ENST00000384847 95 ntBASIC16.78■□□□□ 0.28
RNF138Q8WVD3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 KRT18P35-201ENST00000510488 1269 ntBASIC16.78■□□□□ 0.28
RNF138Q8WVD3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 AL121956.5-201ENST00000625261 221 ntBASIC16.78■□□□□ 0.28
RNF138Q8WVD3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 LINC01311-201ENST00000565162 1445 ntBASIC16.78■□□□□ 0.28
RNF138Q8WVD3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.78■□□□□ 0.28
RNF138Q8WVD3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 AL136038.3-201ENST00000561909 1096 ntBASIC16.77■□□□□ 0.28
RNF138Q8WVD3 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.77■□□□□ 0.28
RNF138Q8WVD3 AL445228.2-201ENST00000605589 952 ntBASIC16.77■□□□□ 0.28
RNF138Q8WVD3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms