Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 TSSC2-201ENST00000450217 709 ntBASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 AL136038.4-201ENST00000603606 1261 ntBASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SHKBP1Q8TBC3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 AL391807.1-203ENST00000604392 2365 ntBASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.52■□□□□ 0.72
SHKBP1Q8TBC3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.52■□□□□ 0.71
SHKBP1Q8TBC3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHKBP1Q8TBC3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SHKBP1Q8TBC3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
SHKBP1Q8TBC3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 KRT18P23-201ENST00000435622 1283 ntBASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 AP002383.4-201ENST00000442518 975 ntBASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 BX276092.5-203ENST00000456199 560 ntBASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 MIR3180-1-201ENST00000580374 94 ntBASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 MIR3180-3-201ENST00000584616 94 ntBASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 AL121672.3-201ENST00000608644 468 ntBASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 FEM1AP3-201ENST00000403722 1741 ntBASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SHKBP1Q8TBC3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SHKBP1Q8TBC3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms