Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PAF1Q8N7H5 FER1L4-210ENST00000615531 5998 ntBASIC19.12■□□□□ 0.65
PAF1Q8N7H5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.12■□□□□ 0.65
PAF1Q8N7H5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.12■□□□□ 0.65
PAF1Q8N7H5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PAF1Q8N7H5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
PAF1Q8N7H5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PAF1Q8N7H5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PAF1Q8N7H5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.12■□□□□ 0.65
PAF1Q8N7H5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PAF1Q8N7H5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.12■□□□□ 0.65
PAF1Q8N7H5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.12■□□□□ 0.65
PAF1Q8N7H5 FEM1AP3-201ENST00000403722 1741 ntBASIC19.11■□□□□ 0.65
PAF1Q8N7H5 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 TSPY14P-201ENST00000303979 915 ntBASIC19.11■□□□□ 0.65
PAF1Q8N7H5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 CA15P1-201ENST00000481698 905 ntBASIC19.11■□□□□ 0.65
PAF1Q8N7H5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.11■□□□□ 0.65
PAF1Q8N7H5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PAF1Q8N7H5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 AC145285.6-201ENST00000604632 637 ntBASIC19.1■□□□□ 0.65
PAF1Q8N7H5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.1■□□□□ 0.65
PAF1Q8N7H5 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PAF1Q8N7H5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PAF1Q8N7H5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PAF1Q8N7H5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PAF1Q8N7H5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PAF1Q8N7H5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PAF1Q8N7H5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PAF1Q8N7H5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PAF1Q8N7H5 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
PAF1Q8N7H5 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.08■□□□□ 0.64
PAF1Q8N7H5 AL137013.1-201ENST00000432946 1228 ntBASIC19.08■□□□□ 0.64
PAF1Q8N7H5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.08■□□□□ 0.64
PAF1Q8N7H5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PAF1Q8N7H5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms