Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 TSPY7P-201ENST00000431358 1114 ntBASIC18.21■□□□□ 0.51
CPSF7Q8N684 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPSF7Q8N684 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPSF7Q8N684 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPSF7Q8N684 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPSF7Q8N684 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPSF7Q8N684 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 AC090340.1-201ENST00000620778 4980 ntBASIC18.21■□□□□ 0.51
CPSF7Q8N684 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.21■□□□□ 0.51
CPSF7Q8N684 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.21■□□□□ 0.5
CPSF7Q8N684 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 TSPY23P-201ENST00000440136 739 ntBASIC18.2■□□□□ 0.5
CPSF7Q8N684 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.2■□□□□ 0.5
CPSF7Q8N684 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPSF7Q8N684 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 AL135905.2-201ENST00000584934 1404 ntBASIC18.19■□□□□ 0.5
CPSF7Q8N684 AL049637.2-201ENST00000641778 930 ntBASIC18.19■□□□□ 0.5
CPSF7Q8N684 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CPSF7Q8N684 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPSF7Q8N684 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.18■□□□□ 0.5
CPSF7Q8N684 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.18■□□□□ 0.5
CPSF7Q8N684 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CPSF7Q8N684 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.18■□□□□ 0.5
CPSF7Q8N684 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.18■□□□□ 0.5
CPSF7Q8N684 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPSF7Q8N684 SLC25A6P5-201ENST00000435663 894 ntBASIC18.18■□□□□ 0.5
CPSF7Q8N684 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CPSF7Q8N684 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
CPSF7Q8N684 AP001412.1-201ENST00000608405 714 ntBASIC18.18■□□□□ 0.5
CPSF7Q8N684 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CPSF7Q8N684 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms