Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCDC170Q8IYT3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
CCDC170Q8IYT3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC170Q8IYT3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCDC170Q8IYT3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 MYLKP1-201ENST00000509077 1580 ntBASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 KRT18P41-201ENST00000518924 1277 ntBASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 HTR7P1-201ENST00000538670 1336 ntBASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 AC090340.1-201ENST00000620778 4980 ntBASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CCDC170Q8IYT3 AC134043.2-201ENST00000624206 2238 ntBASIC20■□□□□ 0.79
CCDC170Q8IYT3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC170Q8IYT3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC170Q8IYT3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC170Q8IYT3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
CCDC170Q8IYT3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC170Q8IYT3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20■□□□□ 0.79
CCDC170Q8IYT3 AC004980.1-204ENST00000429707 299 ntBASIC20■□□□□ 0.79
CCDC170Q8IYT3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20■□□□□ 0.79
CCDC170Q8IYT3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20■□□□□ 0.79
CCDC170Q8IYT3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC170Q8IYT3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC170Q8IYT3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20■□□□□ 0.79
CCDC170Q8IYT3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20■□□□□ 0.79
CCDC170Q8IYT3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20■□□□□ 0.79
CCDC170Q8IYT3 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC170Q8IYT3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC170Q8IYT3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC170Q8IYT3 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC170Q8IYT3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC170Q8IYT3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20■□□□□ 0.79
CCDC170Q8IYT3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 AP003097.1-201ENST00000530657 1135 ntBASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC170Q8IYT3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 RCC2P3-201ENST00000418112 1537 ntBASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 LINC00896-202ENST00000609602 2128 ntBASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC170Q8IYT3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms