Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 AC012640.2-201ENST00000561606 901 ntBASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC12.5□□□□□ -0.41
VPS13DQ5THJ4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 MINOS1P3-201ENST00000457048 203 ntBASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 RPL13AP23-201ENST00000480739 586 ntBASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 MIR149-201ENST00000384879 89 ntBASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
VPS13DQ5THJ4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 AC027601.4-201ENST00000611259 610 ntBASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
VPS13DQ5THJ4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms