Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
NFX1Q12986 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.43■□□□□ 0.86
NFX1Q12986 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
NFX1Q12986 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.43■□□□□ 0.86
NFX1Q12986 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NFX1Q12986 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NFX1Q12986 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
NFX1Q12986 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
NFX1Q12986 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
NFX1Q12986 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.42■□□□□ 0.86
NFX1Q12986 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.42■□□□□ 0.86
NFX1Q12986 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NFX1Q12986 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NFX1Q12986 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
NFX1Q12986 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.42■□□□□ 0.86
NFX1Q12986 HLA-F-220ENST00000434407 884 ntBASIC20.42■□□□□ 0.86
NFX1Q12986 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.42■□□□□ 0.86
NFX1Q12986 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.42■□□□□ 0.86
NFX1Q12986 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.42■□□□□ 0.86
NFX1Q12986 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.42■□□□□ 0.86
NFX1Q12986 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.42■□□□□ 0.86
NFX1Q12986 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.42■□□□□ 0.86
NFX1Q12986 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.42■□□□□ 0.86
NFX1Q12986 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.42■□□□□ 0.86
NFX1Q12986 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.42■□□□□ 0.86
NFX1Q12986 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
NFX1Q12986 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.42■□□□□ 0.86
NFX1Q12986 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NFX1Q12986 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.41■□□□□ 0.86
NFX1Q12986 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NFX1Q12986 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
NFX1Q12986 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.41■□□□□ 0.86
NFX1Q12986 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.41■□□□□ 0.86
NFX1Q12986 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.41■□□□□ 0.86
NFX1Q12986 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
NFX1Q12986 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.41■□□□□ 0.86
NFX1Q12986 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.41■□□□□ 0.86
NFX1Q12986 MIR3652-201ENST00000579335 131 ntBASIC20.41■□□□□ 0.86
NFX1Q12986 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 KRT8P7-201ENST00000533003 1432 ntBASIC20.41■□□□□ 0.86
NFX1Q12986 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.41■□□□□ 0.86
NFX1Q12986 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.41■□□□□ 0.86
NFX1Q12986 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NFX1Q12986 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NFX1Q12986 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NFX1Q12986 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NFX1Q12986 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NFX1Q12986 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NFX1Q12986 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NFX1Q12986 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
NFX1Q12986 MIR564-202ENST00000385049 94 ntBASIC20.4■□□□□ 0.86
NFX1Q12986 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.4■□□□□ 0.86
NFX1Q12986 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.4■□□□□ 0.86
NFX1Q12986 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.4■□□□□ 0.86
NFX1Q12986 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.4■□□□□ 0.86
NFX1Q12986 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.4■□□□□ 0.86
NFX1Q12986 TPM4P1-201ENST00000436100 807 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms