Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
EIF4A1P60842 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC23.78■■□□□ 1.4
EIF4A1P60842 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC23.78■■□□□ 1.4
EIF4A1P60842 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
EIF4A1P60842 AC024563.2-201ENST00000603282 481 ntBASIC23.78■■□□□ 1.4
EIF4A1P60842 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
EIF4A1P60842 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.78■■□□□ 1.4
EIF4A1P60842 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.78■■□□□ 1.4
EIF4A1P60842 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.78■■□□□ 1.4
EIF4A1P60842 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC23.78■■□□□ 1.4
EIF4A1P60842 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EIF4A1P60842 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
EIF4A1P60842 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
EIF4A1P60842 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
EIF4A1P60842 IGHGP-201ENST00000390555 1178 ntBASIC23.77■■□□□ 1.4
EIF4A1P60842 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC23.77■■□□□ 1.4
EIF4A1P60842 SKP2-204ENST00000508514 821 ntTSL 3 BASIC23.77■■□□□ 1.4
EIF4A1P60842 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
EIF4A1P60842 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC23.77■■□□□ 1.4
EIF4A1P60842 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.77■■□□□ 1.4
EIF4A1P60842 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC23.77■■□□□ 1.4
EIF4A1P60842 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
EIF4A1P60842 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC23.77■■□□□ 1.4
EIF4A1P60842 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
EIF4A1P60842 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
EIF4A1P60842 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.76■■□□□ 1.39
EIF4A1P60842 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
EIF4A1P60842 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
EIF4A1P60842 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
EIF4A1P60842 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
EIF4A1P60842 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
EIF4A1P60842 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
EIF4A1P60842 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
EIF4A1P60842 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.76■■□□□ 1.39
EIF4A1P60842 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC23.76■■□□□ 1.39
EIF4A1P60842 TPSP2-201ENST00000561760 610 ntBASIC23.76■■□□□ 1.39
EIF4A1P60842 AC009065.1-201ENST00000564055 1225 ntBASIC23.76■■□□□ 1.39
EIF4A1P60842 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
EIF4A1P60842 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC23.76■■□□□ 1.39
EIF4A1P60842 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC23.76■■□□□ 1.39
EIF4A1P60842 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.76■■□□□ 1.39
EIF4A1P60842 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
EIF4A1P60842 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
EIF4A1P60842 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
EIF4A1P60842 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 AL499627.1-201ENST00000569373 2188 ntBASIC23.75■■□□□ 1.39
EIF4A1P60842 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.75■■□□□ 1.39
EIF4A1P60842 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.75■■□□□ 1.39
EIF4A1P60842 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.75■■□□□ 1.39
EIF4A1P60842 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
EIF4A1P60842 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC23.75■■□□□ 1.39
EIF4A1P60842 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.75■■□□□ 1.39
EIF4A1P60842 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 AL450487.1-201ENST00000426799 995 ntBASIC23.75■■□□□ 1.39
EIF4A1P60842 DRAXINP1-201ENST00000437611 948 ntBASIC23.75■■□□□ 1.39
EIF4A1P60842 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC23.75■■□□□ 1.39
EIF4A1P60842 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC23.75■■□□□ 1.39
EIF4A1P60842 GPR32P1-201ENST00000601788 811 ntBASIC23.75■■□□□ 1.39
EIF4A1P60842 AL121894.2-201ENST00000602977 491 ntBASIC23.75■■□□□ 1.39
EIF4A1P60842 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
EIF4A1P60842 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
EIF4A1P60842 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.74■■□□□ 1.39
EIF4A1P60842 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
EIF4A1P60842 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.74■■□□□ 1.39
EIF4A1P60842 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.74■■□□□ 1.39
EIF4A1P60842 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 KRT18P1-202ENST00000452408 1331 ntBASIC23.74■■□□□ 1.39
EIF4A1P60842 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
EIF4A1P60842 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
EIF4A1P60842 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.74■■□□□ 1.39
EIF4A1P60842 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 KRT89P-201ENST00000620027 1478 ntBASIC23.74■■□□□ 1.39
EIF4A1P60842 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
EIF4A1P60842 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
EIF4A1P60842 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
EIF4A1P60842 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.73■■□□□ 1.39
EIF4A1P60842 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.73■■□□□ 1.39
EIF4A1P60842 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
EIF4A1P60842 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
EIF4A1P60842 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
EIF4A1P60842 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.73■■□□□ 1.39
EIF4A1P60842 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms