Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DEFA3P59666 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.36■□□□□ 0.21
DEFA3P59666 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
DEFA3P59666 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
DEFA3P59666 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
DEFA3P59666 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DEFA3P59666 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DEFA3P59666 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.36■□□□□ 0.21
DEFA3P59666 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DEFA3P59666 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.35■□□□□ 0.21
DEFA3P59666 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.35■□□□□ 0.21
DEFA3P59666 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.35■□□□□ 0.21
DEFA3P59666 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
DEFA3P59666 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
DEFA3P59666 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.35■□□□□ 0.21
DEFA3P59666 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
DEFA3P59666 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 ABHD17AP5-201ENST00000580133 923 ntBASIC16.35■□□□□ 0.21
DEFA3P59666 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
DEFA3P59666 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
DEFA3P59666 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
DEFA3P59666 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.35■□□□□ 0.21
DEFA3P59666 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.35■□□□□ 0.21
DEFA3P59666 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DEFA3P59666 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
DEFA3P59666 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.34■□□□□ 0.21
DEFA3P59666 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
DEFA3P59666 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.34■□□□□ 0.21
DEFA3P59666 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.34■□□□□ 0.21
DEFA3P59666 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
DEFA3P59666 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 AL513477.1-201ENST00000602865 2407 ntBASIC16.34■□□□□ 0.21
DEFA3P59666 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.34■□□□□ 0.21
DEFA3P59666 IGHV3-19-201ENST00000521488 291 ntBASIC16.34■□□□□ 0.21
DEFA3P59666 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.34■□□□□ 0.21
DEFA3P59666 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.34■□□□□ 0.21
DEFA3P59666 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.34■□□□□ 0.21
DEFA3P59666 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.34■□□□□ 0.21
DEFA3P59666 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DEFA3P59666 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
DEFA3P59666 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.34■□□□□ 0.21
DEFA3P59666 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
DEFA3P59666 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DEFA3P59666 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.33■□□□□ 0.21
DEFA3P59666 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
DEFA3P59666 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.33■□□□□ 0.21
DEFA3P59666 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.33■□□□□ 0.21
DEFA3P59666 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.33■□□□□ 0.21
DEFA3P59666 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.33■□□□□ 0.21
DEFA3P59666 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.33■□□□□ 0.21
DEFA3P59666 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.33■□□□□ 0.21
DEFA3P59666 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
DEFA3P59666 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DEFA3P59666 MST1L-201ENST00000442552 2185 ntBASIC16.33■□□□□ 0.2
DEFA3P59666 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
DEFA3P59666 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
DEFA3P59666 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DEFA3P59666 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
DEFA3P59666 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DEFA3P59666 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DEFA3P59666 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DEFA3P59666 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DEFA3P59666 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DEFA3P59666 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
DEFA3P59666 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.33■□□□□ 0.2
DEFA3P59666 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms