Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CLDN2P57739 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CLDN2P57739 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN2P57739 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CLDN2P57739 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 TSPY22P-201ENST00000427496 604 ntBASIC18.36■□□□□ 0.53
CLDN2P57739 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
CLDN2P57739 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.36■□□□□ 0.53
CLDN2P57739 KRT8P26-201ENST00000534154 1276 ntBASIC18.36■□□□□ 0.53
CLDN2P57739 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN2P57739 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CLDN2P57739 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.36■□□□□ 0.53
CLDN2P57739 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLDN2P57739 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CLDN2P57739 HEIH-201ENST00000623091 1652 ntBASIC18.36■□□□□ 0.53
CLDN2P57739 Z98044.1-201ENST00000632503 1764 ntBASIC18.36■□□□□ 0.53
CLDN2P57739 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.36■□□□□ 0.53
CLDN2P57739 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CLDN2P57739 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN2P57739 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLDN2P57739 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLDN2P57739 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CLDN2P57739 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN2P57739 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN2P57739 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLDN2P57739 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN2P57739 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.35■□□□□ 0.53
CLDN2P57739 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.35■□□□□ 0.53
CLDN2P57739 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.35■□□□□ 0.53
CLDN2P57739 MIR3180-1-201ENST00000580374 94 ntBASIC18.35■□□□□ 0.53
CLDN2P57739 MIR3180-3-201ENST00000584616 94 ntBASIC18.35■□□□□ 0.53
CLDN2P57739 AP002414.4-201ENST00000589764 1148 ntBASIC18.35■□□□□ 0.53
CLDN2P57739 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CLDN2P57739 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.35■□□□□ 0.53
CLDN2P57739 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN2P57739 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLDN2P57739 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.35■□□□□ 0.53
CLDN2P57739 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.34■□□□□ 0.53
CLDN2P57739 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN2P57739 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.34■□□□□ 0.53
CLDN2P57739 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN2P57739 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.34■□□□□ 0.53
CLDN2P57739 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CLDN2P57739 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLDN2P57739 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CLDN2P57739 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN2P57739 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN2P57739 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 AC116562.4-201ENST00000641316 2276 ntBASIC18.34■□□□□ 0.53
CLDN2P57739 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLDN2P57739 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN2P57739 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN2P57739 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLDN2P57739 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.34■□□□□ 0.53
CLDN2P57739 MTMR9LP-203ENST00000426597 1545 ntBASIC18.33■□□□□ 0.53
CLDN2P57739 AC005332.7-201ENST00000614046 2005 ntBASIC18.33■□□□□ 0.53
CLDN2P57739 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN2P57739 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN2P57739 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN2P57739 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN2P57739 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN2P57739 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN2P57739 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.33■□□□□ 0.53
CLDN2P57739 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.33■□□□□ 0.53
CLDN2P57739 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms