Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CLDN17P56750 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 WIZP1-201ENST00000531444 2299 ntBASIC16.61■□□□□ 0.25
CLDN17P56750 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CLDN17P56750 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CLDN17P56750 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.61■□□□□ 0.25
CLDN17P56750 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN17P56750 AC133561.5-201ENST00000635547 218 ntBASIC16.61■□□□□ 0.25
CLDN17P56750 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN17P56750 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
CLDN17P56750 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN17P56750 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN17P56750 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 KRT18P22-201ENST00000402024 1347 ntBASIC16.61■□□□□ 0.25
CLDN17P56750 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CLDN17P56750 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN17P56750 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CLDN17P56750 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN17P56750 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.61■□□□□ 0.25
CLDN17P56750 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.61■□□□□ 0.25
CLDN17P56750 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLDN17P56750 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CLDN17P56750 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN17P56750 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN17P56750 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLDN17P56750 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 MIR564-202ENST00000385049 94 ntBASIC16.6■□□□□ 0.25
CLDN17P56750 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN17P56750 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN17P56750 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN17P56750 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN17P56750 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN17P56750 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN17P56750 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN17P56750 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN17P56750 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN17P56750 AL499627.1-201ENST00000569373 2188 ntBASIC16.6■□□□□ 0.25
CLDN17P56750 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN17P56750 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CLDN17P56750 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN17P56750 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN17P56750 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN17P56750 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN17P56750 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN17P56750 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLDN17P56750 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN17P56750 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN17P56750 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN17P56750 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN17P56750 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN17P56750 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CLDN17P56750 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.59■□□□□ 0.25
CLDN17P56750 FAM87A-204ENST00000613235 858 ntBASIC16.59■□□□□ 0.25
CLDN17P56750 CR769767.2-201ENST00000622735 460 ntBASIC16.59■□□□□ 0.25
CLDN17P56750 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN17P56750 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN17P56750 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN17P56750 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN17P56750 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN17P56750 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN17P56750 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLDN17P56750 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN17P56750 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN17P56750 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN17P56750 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN17P56750 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN17P56750 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN17P56750 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.58■□□□□ 0.25
CLDN17P56750 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN17P56750 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.58■□□□□ 0.25
CLDN17P56750 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN17P56750 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLDN17P56750 HMGA1P5-201ENST00000412453 271 ntBASIC16.58■□□□□ 0.24
CLDN17P56750 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms