Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1LP55160 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
NCKAP1LP55160 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.37■□□□□ 0.85
NCKAP1LP55160 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1LP55160 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
NCKAP1LP55160 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.37■□□□□ 0.85
NCKAP1LP55160 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.37■□□□□ 0.85
NCKAP1LP55160 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.37■□□□□ 0.85
NCKAP1LP55160 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.37■□□□□ 0.85
NCKAP1LP55160 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1LP55160 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
NCKAP1LP55160 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NCKAP1LP55160 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NCKAP1LP55160 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
NCKAP1LP55160 AL163051.1-201ENST00000569214 1512 ntBASIC20.37■□□□□ 0.85
NCKAP1LP55160 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.36■□□□□ 0.85
NCKAP1LP55160 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NCKAP1LP55160 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.36■□□□□ 0.85
NCKAP1LP55160 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 FAM8A6P-201ENST00000407496 1135 ntBASIC20.36■□□□□ 0.85
NCKAP1LP55160 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
NCKAP1LP55160 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.36■□□□□ 0.85
NCKAP1LP55160 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.36■□□□□ 0.85
NCKAP1LP55160 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NCKAP1LP55160 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1LP55160 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1LP55160 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1LP55160 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1LP55160 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
NCKAP1LP55160 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.35■□□□□ 0.85
NCKAP1LP55160 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1LP55160 STARP1-201ENST00000397973 869 ntBASIC20.35■□□□□ 0.85
NCKAP1LP55160 SPDYE15P-201ENST00000424157 909 ntBASIC20.35■□□□□ 0.85
NCKAP1LP55160 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.35■□□□□ 0.85
NCKAP1LP55160 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1LP55160 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1LP55160 HOMER2P1-201ENST00000455653 964 ntBASIC20.35■□□□□ 0.85
NCKAP1LP55160 AC022616.7-201ENST00000525383 220 ntBASIC20.35■□□□□ 0.85
NCKAP1LP55160 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1LP55160 AL157888.1-201ENST00000631930 593 ntBASIC20.35■□□□□ 0.85
NCKAP1LP55160 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NCKAP1LP55160 WIZP1-201ENST00000531444 2299 ntBASIC20.35■□□□□ 0.85
NCKAP1LP55160 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1LP55160 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1LP55160 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NCKAP1LP55160 AC126763.1-201ENST00000552015 2118 ntBASIC20.35■□□□□ 0.85
NCKAP1LP55160 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
NCKAP1LP55160 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.34■□□□□ 0.85
NCKAP1LP55160 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.34■□□□□ 0.85
NCKAP1LP55160 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.34■□□□□ 0.85
NCKAP1LP55160 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.34■□□□□ 0.85
NCKAP1LP55160 KRT18P38-201ENST00000449496 1282 ntBASIC20.34■□□□□ 0.85
NCKAP1LP55160 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.34■□□□□ 0.85
NCKAP1LP55160 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.34■□□□□ 0.85
NCKAP1LP55160 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.34■□□□□ 0.85
NCKAP1LP55160 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NCKAP1LP55160 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.34■□□□□ 0.85
NCKAP1LP55160 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
NCKAP1LP55160 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NCKAP1LP55160 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.33■□□□□ 0.85
NCKAP1LP55160 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCKAP1LP55160 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
NCKAP1LP55160 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCKAP1LP55160 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCKAP1LP55160 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCKAP1LP55160 AC073592.3-201ENST00000625118 1834 ntBASIC20.33■□□□□ 0.85
NCKAP1LP55160 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NCKAP1LP55160 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
NCKAP1LP55160 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.33■□□□□ 0.85
NCKAP1LP55160 RASA4DP-201ENST00000460726 1199 ntBASIC20.33■□□□□ 0.85
NCKAP1LP55160 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.33■□□□□ 0.85
NCKAP1LP55160 AC034232.1-201ENST00000506026 1064 ntBASIC20.33■□□□□ 0.85
NCKAP1LP55160 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NCKAP1LP55160 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NCKAP1LP55160 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.33■□□□□ 0.84
NCKAP1LP55160 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.33■□□□□ 0.84
NCKAP1LP55160 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms