Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EMP3P54852 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.07■□□□□ 0.48
EMP3P54852 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EMP3P54852 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.07■□□□□ 0.48
EMP3P54852 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
EMP3P54852 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.07■□□□□ 0.48
EMP3P54852 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
EMP3P54852 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.07■□□□□ 0.48
EMP3P54852 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EMP3P54852 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.07■□□□□ 0.48
EMP3P54852 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EMP3P54852 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
EMP3P54852 HMGA1P5-201ENST00000412453 271 ntBASIC18.07■□□□□ 0.48
EMP3P54852 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EMP3P54852 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
EMP3P54852 AC007663.1-201ENST00000438948 1240 ntBASIC18.07■□□□□ 0.48
EMP3P54852 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.07■□□□□ 0.48
EMP3P54852 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.07■□□□□ 0.48
EMP3P54852 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
EMP3P54852 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EMP3P54852 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EMP3P54852 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EMP3P54852 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
EMP3P54852 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EMP3P54852 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.06■□□□□ 0.48
EMP3P54852 AC009053.2-201ENST00000563701 2365 ntBASIC18.06■□□□□ 0.48
EMP3P54852 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
EMP3P54852 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.06■□□□□ 0.48
EMP3P54852 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
EMP3P54852 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.06■□□□□ 0.48
EMP3P54852 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
EMP3P54852 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.06■□□□□ 0.48
EMP3P54852 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.06■□□□□ 0.48
EMP3P54852 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.06■□□□□ 0.48
EMP3P54852 AC113347.1-201ENST00000413321 391 ntBASIC18.06■□□□□ 0.48
EMP3P54852 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.06■□□□□ 0.48
EMP3P54852 SLC25A3P1-201ENST00000443844 931 ntBASIC18.06■□□□□ 0.48
EMP3P54852 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.06■□□□□ 0.48
EMP3P54852 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
EMP3P54852 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
EMP3P54852 AL512604.3-201ENST00000569583 964 ntBASIC18.06■□□□□ 0.48
EMP3P54852 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.06■□□□□ 0.48
EMP3P54852 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
EMP3P54852 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
EMP3P54852 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
EMP3P54852 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.06■□□□□ 0.48
EMP3P54852 TEX21P-204ENST00000641479 1693 ntBASIC18.06■□□□□ 0.48
EMP3P54852 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.06■□□□□ 0.48
EMP3P54852 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.05■□□□□ 0.48
EMP3P54852 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.05■□□□□ 0.48
EMP3P54852 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.05■□□□□ 0.48
EMP3P54852 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
EMP3P54852 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
EMP3P54852 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 SEC63P1-201ENST00000425785 1258 ntBASIC18.05■□□□□ 0.48
EMP3P54852 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.05■□□□□ 0.48
EMP3P54852 FAM87A-204ENST00000613235 858 ntBASIC18.05■□□□□ 0.48
EMP3P54852 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.05■□□□□ 0.48
EMP3P54852 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.05■□□□□ 0.48
EMP3P54852 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.05■□□□□ 0.48
EMP3P54852 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.05■□□□□ 0.48
EMP3P54852 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
EMP3P54852 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
EMP3P54852 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
EMP3P54852 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
EMP3P54852 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms