Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX2P50458 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LHX2P50458 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX2P50458 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX2P50458 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX2P50458 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX2P50458 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LHX2P50458 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX2P50458 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LHX2P50458 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.61■□□□□ 0.25
LHX2P50458 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX2P50458 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX2P50458 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.61■□□□□ 0.25
LHX2P50458 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX2P50458 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX2P50458 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.61■□□□□ 0.25
LHX2P50458 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.61■□□□□ 0.25
LHX2P50458 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
LHX2P50458 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LHX2P50458 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LHX2P50458 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.61■□□□□ 0.25
LHX2P50458 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.61■□□□□ 0.25
LHX2P50458 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX2P50458 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX2P50458 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LHX2P50458 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LHX2P50458 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX2P50458 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX2P50458 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
LHX2P50458 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX2P50458 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX2P50458 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX2P50458 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX2P50458 AL645929.1-201ENST00000420084 975 ntBASIC16.6■□□□□ 0.25
LHX2P50458 UPK3BP1-201ENST00000428678 509 ntBASIC16.6■□□□□ 0.25
LHX2P50458 PVRIG2P-201ENST00000435460 978 ntBASIC16.6■□□□□ 0.25
LHX2P50458 AC009065.1-201ENST00000564055 1225 ntBASIC16.6■□□□□ 0.25
LHX2P50458 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX2P50458 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.6■□□□□ 0.25
LHX2P50458 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX2P50458 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.6■□□□□ 0.25
LHX2P50458 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LHX2P50458 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 AL163051.1-201ENST00000569214 1512 ntBASIC16.6■□□□□ 0.25
LHX2P50458 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LHX2P50458 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.59■□□□□ 0.25
LHX2P50458 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.59■□□□□ 0.25
LHX2P50458 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.59■□□□□ 0.25
LHX2P50458 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.59■□□□□ 0.25
LHX2P50458 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.59■□□□□ 0.25
LHX2P50458 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LHX2P50458 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.59■□□□□ 0.25
LHX2P50458 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LHX2P50458 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LHX2P50458 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LHX2P50458 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.59■□□□□ 0.25
LHX2P50458 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
LHX2P50458 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LHX2P50458 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LHX2P50458 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LHX2P50458 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.58■□□□□ 0.25
LHX2P50458 AIRN-201ENST00000601203 4374 ntBASIC16.58■□□□□ 0.25
LHX2P50458 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.58■□□□□ 0.24
LHX2P50458 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.58■□□□□ 0.24
LHX2P50458 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms