Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SRP9P49458 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.52■□□□□ 0.24
SRP9P49458 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 MIR718-201ENST00000390190 70 ntBASIC16.52■□□□□ 0.24
SRP9P49458 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.52■□□□□ 0.24
SRP9P49458 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.52■□□□□ 0.24
SRP9P49458 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.52■□□□□ 0.24
SRP9P49458 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.52■□□□□ 0.24
SRP9P49458 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.52■□□□□ 0.24
SRP9P49458 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.52■□□□□ 0.24
SRP9P49458 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SRP9P49458 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
SRP9P49458 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
SRP9P49458 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRP9P49458 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.52■□□□□ 0.23
SRP9P49458 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SRP9P49458 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SRP9P49458 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.52■□□□□ 0.23
SRP9P49458 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRP9P49458 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.52■□□□□ 0.23
SRP9P49458 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRP9P49458 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SRP9P49458 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.52■□□□□ 0.23
SRP9P49458 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.52■□□□□ 0.23
SRP9P49458 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.51■□□□□ 0.23
SRP9P49458 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.51■□□□□ 0.23
SRP9P49458 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SRP9P49458 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.51■□□□□ 0.23
SRP9P49458 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.51■□□□□ 0.23
SRP9P49458 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.51■□□□□ 0.23
SRP9P49458 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SRP9P49458 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.51■□□□□ 0.23
SRP9P49458 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.51■□□□□ 0.23
SRP9P49458 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.51■□□□□ 0.23
SRP9P49458 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
SRP9P49458 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.51■□□□□ 0.23
SRP9P49458 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SRP9P49458 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.51■□□□□ 0.23
SRP9P49458 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.51■□□□□ 0.23
SRP9P49458 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
SRP9P49458 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.51■□□□□ 0.23
SRP9P49458 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SRP9P49458 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
SRP9P49458 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SRP9P49458 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
SRP9P49458 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.5■□□□□ 0.23
SRP9P49458 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.5■□□□□ 0.23
SRP9P49458 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.5■□□□□ 0.23
SRP9P49458 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.5■□□□□ 0.23
SRP9P49458 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.5■□□□□ 0.23
SRP9P49458 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
SRP9P49458 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.5■□□□□ 0.23
SRP9P49458 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.5■□□□□ 0.23
SRP9P49458 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.5■□□□□ 0.23
SRP9P49458 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.5■□□□□ 0.23
SRP9P49458 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SRP9P49458 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms