Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A12P48065 KRT8P7-201ENST00000533003 1432 ntBASIC17.96■□□□□ 0.47
SLC6A12P48065 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC6A12P48065 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC6A12P48065 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC6A12P48065 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC6A12P48065 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SLC6A12P48065 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC6A12P48065 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC6A12P48065 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC6A12P48065 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A12P48065 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC6A12P48065 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A12P48065 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC6A12P48065 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
SLC6A12P48065 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC6A12P48065 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A12P48065 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A12P48065 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLC6A12P48065 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SLC6A12P48065 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.94■□□□□ 0.46
SLC6A12P48065 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC6A12P48065 AC128688.1-201ENST00000487626 519 ntBASIC17.94■□□□□ 0.46
SLC6A12P48065 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC6A12P48065 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC6A12P48065 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SLC6A12P48065 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC6A12P48065 FAM87A-204ENST00000613235 858 ntBASIC17.94■□□□□ 0.46
SLC6A12P48065 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC6A12P48065 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SLC6A12P48065 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC6A12P48065 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SLC6A12P48065 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A12P48065 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
SLC6A12P48065 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A12P48065 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A12P48065 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.93■□□□□ 0.46
SLC6A12P48065 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A12P48065 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
SLC6A12P48065 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 KRT18P23-201ENST00000435622 1283 ntBASIC17.93■□□□□ 0.46
SLC6A12P48065 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.93■□□□□ 0.46
SLC6A12P48065 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.93■□□□□ 0.46
SLC6A12P48065 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SLC6A12P48065 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SLC6A12P48065 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms