Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.745e-7■■■□□ 17.7
MATR3P43243 TEX261-205ENST00000478068 3579 ntTSL 211.25□□□□□ -0.615e-7■■■□□ 17.7
MATR3P43243 AC007040.2-202ENST00000453130 423 ntTSL 38.35□□□□□ -1.075e-7■■■□□ 17.7
MATR3P43243 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.377e-7■■■□□ 17.7
MATR3P43243 CHN2-226ENST00000495789 725 ntTSL 1 (best) BASIC9.2□□□□□ -0.947e-7■■■□□ 17.7
MATR3P43243 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.75■■□□□ 1.391e-8■■■□□ 17.7
MATR3P43243 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.111e-8■■■□□ 17.7
MATR3P43243 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.9■□□□□ 0.941e-8■■■□□ 17.7
MATR3P43243 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.84■□□□□ 0.131e-8■■■□□ 17.7
MATR3P43243 HERC2-209ENST00000567869 3523 ntTSL 29.8□□□□□ -0.845e-6■■■□□ 17.7
MATR3P43243 USP48-202ENST00000374730 570 ntTSL 45.07□□□□□ -1.61e-8■■■□□ 17.7
MATR3P43243 NGDN-211ENST00000556699 725 ntTSL 26.1□□□□□ -1.431e-6■■■□□ 17.7
MATR3P43243 VCL-205ENST00000478896 727 ntTSL 514.49□□□□□ -0.095e-6■■■□□ 17.7
MATR3P43243 PLEKHA1-206ENST00000463663 617 ntTSL 526.98■■□□□ 1.911e-6■■■□□ 17.6
MATR3P43243 PLEKHA1-208ENST00000494222 603 ntTSL 322.31■■□□□ 1.161e-6■■■□□ 17.6
MATR3P43243 PLEKHA1-202ENST00000368989 3771 ntTSL 5 BASIC12.37□□□□□ -0.431e-6■■■□□ 17.6
MATR3P43243 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.41e-6■■■□□ 17.6
MATR3P43243 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.651e-6■■■□□ 17.6
MATR3P43243 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC9.79□□□□□ -0.841e-6■■■□□ 17.6
MATR3P43243 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.317e-7■■■□□ 17.6
MATR3P43243 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.387e-7■■■□□ 17.6
MATR3P43243 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.497e-7■■■□□ 17.6
MATR3P43243 R3HDM1-215ENST00000483021 539 ntTSL 321.27■■□□□ 14e-9■■■□□ 17.6
MATR3P43243 R3HDM1-213ENST00000463230 2241 ntTSL 214.26□□□□□ -0.134e-9■■■□□ 17.6
MATR3P43243 R3HDM1-208ENST00000438014 582 ntTSL 58.87□□□□□ -0.994e-9■■■□□ 17.6
MATR3P43243 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.47□□□□□ -1.374e-9■■■□□ 17.6
MATR3P43243 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.514e-9■■■□□ 17.6
MATR3P43243 R3HDM1-219ENST00000488035 502 ntTSL 32.69□□□□□ -1.984e-9■■■□□ 17.6
MATR3P43243 VPS54-204ENST00000416400 1277 ntTSL 1 (best)4.65□□□□□ -1.673e-6■■■□□ 17.6
MATR3P43243 BIRC2-210ENST00000533742 720 ntTSL 223.55■■□□□ 1.365e-12■■■□□ 17.6
MATR3P43243 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.89■□□□□ 0.935e-12■■■□□ 17.6
MATR3P43243 BIRC2-207ENST00000531259 572 ntTSL 517.67■□□□□ 0.425e-12■■■□□ 17.6
MATR3P43243 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.62■□□□□ 0.255e-12■■■□□ 17.6
MATR3P43243 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.045e-12■■■□□ 17.6
MATR3P43243 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.175e-12■■■□□ 17.6
MATR3P43243 BIRC2-204ENST00000527910 4073 ntTSL 1 (best)12.51□□□□□ -0.415e-12■■■□□ 17.6
MATR3P43243 BIRC2-201ENST00000227758 3743 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.475e-12■■■□□ 17.6
MATR3P43243 BIRC2-205ENST00000528344 866 ntTSL 58.63□□□□□ -1.035e-12■■■□□ 17.6
MATR3P43243 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.28■■□□□ 1.641e-6■■■□□ 17.6
MATR3P43243 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC24.69■■□□□ 1.541e-6■■■□□ 17.6
MATR3P43243 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.399e-7■■■□□ 17.6
MATR3P43243 ANKRD11-204ENST00000378332 1982 ntTSL 222.96■■□□□ 1.279e-7■■■□□ 17.6
MATR3P43243 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.19e-7■■■□□ 17.6
MATR3P43243 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.059e-7■■■□□ 17.6
MATR3P43243 ANKRD11-207ENST00000562816 573 ntTSL 412.28□□□□□ -0.449e-7■■■□□ 17.6
MATR3P43243 ANKRD11-215ENST00000568512 294 ntTSL 29.86□□□□□ -0.838e-7■■■□□ 17.6
MATR3P43243 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.92■□□□□ 0.469e-9■■■□□ 17.6
MATR3P43243 TUBB-207ENST00000396384 2823 ntTSL 3 BASIC11.54□□□□□ -0.569e-9■■■□□ 17.6
MATR3P43243 TUBB-205ENST00000327892 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.589e-9■■■□□ 17.6
MATR3P43243 TUBB-208ENST00000396389 2903 ntTSL 5 BASIC11.39□□□□□ -0.599e-9■■■□□ 17.6
MATR3P43243 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.48■□□□□ 0.876e-8■■■□□ 17.6
MATR3P43243 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.83e-9■■■□□ 17.6
MATR3P43243 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.496e-8■■■□□ 17.6
MATR3P43243 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.13■□□□□ 0.336e-8■■■□□ 17.6
MATR3P43243 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.25■□□□□ 0.196e-8■■■□□ 17.6
MATR3P43243 APMAP-202ENST00000451442 2117 ntTSL 514.44□□□□□ -0.13e-9■■■□□ 17.6
MATR3P43243 FADS2-203ENST00000355484 2107 ntTSL 213.46□□□□□ -0.256e-8■■■□□ 17.6
MATR3P43243 FADS2-208ENST00000521571 799 ntTSL 37.77□□□□□ -1.176e-8■■■□□ 17.6
MATR3P43243 RFWD2-205ENST00000459744 741 ntTSL 33.1□□□□□ -1.916e-8■■■□□ 17.6
MATR3P43243 WNK2-213ENST00000471076 2344 ntTSL 213.77□□□□□ -0.212e-6■■■□□ 17.6
MATR3P43243 MNAT1-205ENST00000554641 596 ntTSL 34.86□□□□□ -1.633e-6■■■□□ 17.6
MATR3P43243 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.091e-6■■■□□ 17.6
MATR3P43243 NUSAP1-201ENST00000260359 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.651e-6■■■□□ 17.6
MATR3P43243 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.871e-6■■■□□ 17.6
MATR3P43243 NUSAP1-205ENST00000558123 1934 ntTSL 59.25□□□□□ -0.931e-6■■■□□ 17.6
MATR3P43243 NUSAP1-206ENST00000558582 546 ntTSL 58.97□□□□□ -0.971e-6■■■□□ 17.6
MATR3P43243 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.981e-6■■■□□ 17.6
MATR3P43243 NUSAP1-207ENST00000559046 580 ntTSL 58.85□□□□□ -0.991e-6■■■□□ 17.6
MATR3P43243 NUSAP1-209ENST00000559659 529 ntTSL 28.82□□□□□ -11e-6■■■□□ 17.6
MATR3P43243 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC8.8□□□□□ -11e-6■■■□□ 17.6
MATR3P43243 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.181e-6■■■□□ 17.6
MATR3P43243 LINC00894-204ENST00000444489 2951 ntTSL 512.46□□□□□ -0.412e-8■■■□□ 17.6
MATR3P43243 LINC00894-205ENST00000449111 3414 ntTSL 510.43□□□□□ -0.742e-8■■■□□ 17.6
MATR3P43243 UBA1-206ENST00000442035 1054 ntTSL 523.12■■□□□ 1.292e-7■■■□□ 17.6
MATR3P43243 UBA1-208ENST00000457753 809 ntTSL 518.65■□□□□ 0.582e-7■■■□□ 17.6
MATR3P43243 UBA1-204ENST00000412206 1148 ntTSL 515.78■□□□□ 0.122e-7■■■□□ 17.6
MATR3P43243 UBA1-205ENST00000427561 671 ntTSL 514.92□□□□□ -0.022e-7■■■□□ 17.6
MATR3P43243 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC12.11□□□□□ -0.475e-7■■■□□ 17.6
MATR3P43243 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.02□□□□□ -2.253e-6■■■□□ 17.6
MATR3P43243 NFATC3-209ENST00000561714 792 ntTSL 324.5■■□□□ 1.517e-7■■■□□ 17.6
MATR3P43243 NFATC3-210ENST00000562171 707 ntTSL 322.95■■□□□ 1.267e-7■■■□□ 17.6
MATR3P43243 NFATC3-219ENST00000568466 737 ntTSL 222.55■■□□□ 1.27e-7■■■□□ 17.6
MATR3P43243 NFATC3-217ENST00000566893 715 ntTSL 213.47□□□□□ -0.257e-7■■■□□ 17.6
MATR3P43243 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.87□□□□□ -1.637e-7■■■□□ 17.6
MATR3P43243 PHC2-212ENST00000493483 760 ntTSL 325.92■■□□□ 1.743e-8■■■□□ 17.6
MATR3P43243 PHC2-206ENST00000467894 1466 ntTSL 525.3■■□□□ 1.643e-8■■■□□ 17.6
MATR3P43243 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.613e-8■■■□□ 17.6
MATR3P43243 PHC2-210ENST00000485928 2548 ntTSL 224.81■■□□□ 1.563e-8■■■□□ 17.6
MATR3P43243 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.143e-8■■■□□ 17.6
MATR3P43243 PHC2-203ENST00000373422 2799 ntTSL 2 BASIC13.49□□□□□ -0.253e-8■■■□□ 17.6
MATR3P43243 PHC2-204ENST00000431992 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.363e-8■■■□□ 17.6
MATR3P43243 PHC2-211ENST00000486897 547 ntTSL 511.25□□□□□ -0.613e-8■■■□□ 17.6
MATR3P43243 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.07□□□□□ -1.443e-7■■■□□ 17.6
MATR3P43243 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.183e-6■■■□□ 17.6
MATR3P43243 PPIL2-208ENST00000484439 863 ntTSL 58.43□□□□□ -1.063e-6■■■□□ 17.6
MATR3P43243 PPIL2-206ENST00000458567 557 ntTSL 44.16□□□□□ -1.743e-6■■■□□ 17.6
MATR3P43243 CYBRD1-204ENST00000445146 682 ntTSL 319.42■□□□□ 0.71e-7■■■□□ 17.6
MATR3P43243 CYBRD1-207ENST00000494587 549 ntTSL 419.21■□□□□ 0.671e-7■■■□□ 17.6
MATR3P43243 CYBRD1-205ENST00000468308 763 ntTSL 317.42■□□□□ 0.381e-7■■■□□ 17.6
MATR3P43243 CYBRD1-206ENST00000474182 465 ntTSL 516.47■□□□□ 0.231e-7■■■□□ 17.6
Retrieved 100 of 16,209 protein–RNA pairs in 122.5 ms