RNA–Protein interactions for RNA: ENST00000459744.5

RFWD2-205, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 3

Gene RFWD2, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-205ENST00000459744 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
RFWD2-205ENST00000459744 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
RFWD2-205ENST00000459744 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
RFWD2-205ENST00000459744 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
RFWD2-205ENST00000459744 FOXD1Q16676 465 aa16.46■□□□□ 0.23
RFWD2-205ENST00000459744 PLPPR3Q6T4P5 718 aa16.43■□□□□ 0.22
RFWD2-205ENST00000459744 PPP6R1Q9UPN7 881 aa15.84■□□□□ 0.13
RFWD2-205ENST00000459744 ADRA2BP18089 450 aa15.8■□□□□ 0.12
RFWD2-205ENST00000459744 PIAS4Q8N2W9 510 aaPredicted RBP15.46■□□□□ 0.07
RFWD2-205ENST00000459744 MSH5O43196 834 aa15.09■□□□□ 0.01
RFWD2-205ENST00000459744 PPP4R3CPQ6ZMV5 832 aa14.51□□□□□ -0.09
RFWD2-205ENST00000459744 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
RFWD2-205ENST00000459744 SCAF1Q9H7N4 1312 aaKnown RBP14.32□□□□□ -0.12
RFWD2-205ENST00000459744 KCNA4P22459 653 aa14.16□□□□□ -0.14
RFWD2-205ENST00000459744 DMRT2Q9Y5R5 561 aa14.1□□□□□ -0.15
RFWD2-205ENST00000459744 CNKSR2Q8WXI2 1034 aa14.08□□□□□ -0.16
RFWD2-205ENST00000459744 NCBP3Q53F19 620 aaKnown RBP14.03□□□□□ -0.16
RFWD2-205ENST00000459744 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
RFWD2-205ENST00000459744 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
RFWD2-205ENST00000459744 RNF216Q9NWF9 866 aaPredicted RBP13.82□□□□□ -0.2
RFWD2-205ENST00000459744 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
RFWD2-205ENST00000459744 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
RFWD2-205ENST00000459744 DNAJC5BQ9UF47 199 aa13.47□□□□□ -0.25
RFWD2-205ENST00000459744 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
RFWD2-205ENST00000459744 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
RFWD2-205ENST00000459744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.313e-6■□□□□ 8.5
RFWD2-205ENST00000459744 ZBTB22O15209 634 aa13.07□□□□□ -0.32
RFWD2-205ENST00000459744 EHMT2Q96KQ7 1210 aa13.02□□□□□ -0.33
RFWD2-205ENST00000459744 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
RFWD2-205ENST00000459744 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
RFWD2-205ENST00000459744 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
RFWD2-205ENST00000459744 CSRNP3Q8WYN3 585 aa12.92□□□□□ -0.34
RFWD2-205ENST00000459744 MYCNP04198 464 aaPredicted RBP12.81□□□□□ -0.36
RFWD2-205ENST00000459744 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
RFWD2-205ENST00000459744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.66□□□□□ -0.38
RFWD2-205ENST00000459744 CACNB1Q02641 598 aaPredicted RBP12.66□□□□□ -0.38
RFWD2-205ENST00000459744 HNRNPUL2Q1KMD3 747 aaKnown RBP12.66□□□□□ -0.38
RFWD2-205ENST00000459744 SAMD1Q6SPF0 538 aaPredicted RBP12.64□□□□□ -0.39
RFWD2-205ENST00000459744 SPINK5Q9NQ38 1064 aaPredicted RBP12.63□□□□□ -0.39
RFWD2-205ENST00000459744 ATF5Q9Y2D1 282 aaPredicted RBP12.58□□□□□ -0.4
RFWD2-205ENST00000459744 CAPN15O75808 1086 aa12.52□□□□□ -0.41
RFWD2-205ENST00000459744 ATXN8OSP0DMR3 200 aa12.5□□□□□ -0.41
RFWD2-205ENST00000459744 APLP2Q06481 763 aa12.5□□□□□ -0.41
RFWD2-205ENST00000459744 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
RFWD2-205ENST00000459744 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
RFWD2-205ENST00000459744 DSG3P32926 999 aa12.36□□□□□ -0.43
RFWD2-205ENST00000459744 ABCB7O75027 752 aa12.32□□□□□ -0.44
RFWD2-205ENST00000459744 POLA2Q14181 598 aa12.25□□□□□ -0.45
RFWD2-205ENST00000459744 MKRN4PQ13434 485 aaPredicted RBP12.01□□□□□ -0.49
RFWD2-205ENST00000459744 ZBTB12Q9Y330 459 aaPredicted RBP11.96□□□□□ -0.49
RFWD2-205ENST00000459744 FBLN2P98095 1184 aa11.92□□□□□ -0.5
RFWD2-205ENST00000459744 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
RFWD2-205ENST00000459744 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
RFWD2-205ENST00000459744 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
RFWD2-205ENST00000459744 SPDYE2Q495Y8 402 aa11.68□□□□□ -0.54
RFWD2-205ENST00000459744 RBM42Q9BTD8 480 aaKnown RBP11.68□□□□□ -0.54
RFWD2-205ENST00000459744 SPDYE4A6NLX3 237 aa11.66□□□□□ -0.54
RFWD2-205ENST00000459744 FKBP8Q14318 412 aa11.65□□□□□ -0.54
RFWD2-205ENST00000459744 ZNF692Q9BU19 519 aaPredicted RBP11.64□□□□□ -0.55
RFWD2-205ENST00000459744 SSUH2Q9Y2M2 353 aa11.62□□□□□ -0.55
RFWD2-205ENST00000459744 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
RFWD2-205ENST00000459744 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
RFWD2-205ENST00000459744 REM2Q8IYK8 340 aaPredicted RBP11.5□□□□□ -0.57
RFWD2-205ENST00000459744 PROM2Q8N271 834 aa11.48□□□□□ -0.57
RFWD2-205ENST00000459744 PITPNM1O00562 1244 aa11.38□□□□□ -0.59
RFWD2-205ENST00000459744 SPDYE1Q8NFV5 336 aaPredicted RBP11.33□□□□□ -0.6
RFWD2-205ENST00000459744 CLEC11AQ9Y240 323 aa11.33□□□□□ -0.6
RFWD2-205ENST00000459744 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
RFWD2-205ENST00000459744 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
RFWD2-205ENST00000459744 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
RFWD2-205ENST00000459744 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.62
RFWD2-205ENST00000459744 FBXO3Q9UK99 471 aa11.16□□□□□ -0.62
RFWD2-205ENST00000459744 PIP4P2Q8N4L2 257 aa11.15□□□□□ -0.62
RFWD2-205ENST00000459744 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
RFWD2-205ENST00000459744 CREBZFQ9NS37 354 aa11.1□□□□□ -0.63
RFWD2-205ENST00000459744 VASPP50552 380 aaPredicted RBP11.08□□□□□ -0.64
RFWD2-205ENST00000459744 PRKAR2AP13861 404 aaKnown RBP11.07□□□□□ -0.64
RFWD2-205ENST00000459744 MIER1Q8N108 512 aa11.04□□□□□ -0.64
RFWD2-205ENST00000459744 PLCD3Q8N3E9 789 aa11.01□□□□□ -0.65
RFWD2-205ENST00000459744 MNX1P50219 401 aaPredicted RBP10.99□□□□□ -0.65
RFWD2-205ENST00000459744 POTEHQ6S545 545 aa10.98□□□□□ -0.65
RFWD2-205ENST00000459744 IFNLR1Q8IU57 520 aaPredicted RBP10.96□□□□□ -0.65
RFWD2-205ENST00000459744 FARP1Q9Y4F1 1045 aaPredicted RBP10.95□□□□□ -0.66
RFWD2-205ENST00000459744 PLEKHG5O94827 1062 aa10.91□□□□□ -0.66
RFWD2-205ENST00000459744 KLHL34Q8N239 644 aa10.87□□□□□ -0.67
RFWD2-205ENST00000459744 ZBTB47Q9UFB7 747 aaPredicted RBP10.83□□□□□ -0.68
RFWD2-205ENST00000459744 NPM1P06748 294 aaKnown RBP eCLIP10.82□□□□□ -0.68
RFWD2-205ENST00000459744 NUBP1P53384 320 aa10.81□□□□□ -0.68
RFWD2-205ENST00000459744 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
RFWD2-205ENST00000459744 C19orf67A6NJJ6 358 aa10.78□□□□□ -0.68
RFWD2-205ENST00000459744 SPOCK2Q92563 424 aa10.78□□□□□ -0.68
RFWD2-205ENST00000459744 HAX1O00165 279 aa10.77□□□□□ -0.69
RFWD2-205ENST00000459744 EVX2Q03828 476 aa10.77□□□□□ -0.69
RFWD2-205ENST00000459744 CD44P16070 742 aaKnown RBP10.75□□□□□ -0.69
RFWD2-205ENST00000459744 TSPYL2Q9H2G4 693 aaPredicted RBP10.72□□□□□ -0.69
RFWD2-205ENST00000459744 ZRANB1Q9UGI0 708 aa10.68□□□□□ -0.7
RFWD2-205ENST00000459744 DCAF8Q5TAQ9 597 aa10.66□□□□□ -0.7
RFWD2-205ENST00000459744 FAM212AQ96EL1 285 aa10.66□□□□□ -0.7
RFWD2-205ENST00000459744 CCDC61Q9Y6R9 512 aa10.65□□□□□ -0.7
RFWD2-205ENST00000459744 PAK3O75914 559 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms