Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.53■□□□□ 0.88
RFC5P40937 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.53■□□□□ 0.88
RFC5P40937 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
RFC5P40937 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 PCED1CP-201ENST00000419887 785 ntBASIC20.53■□□□□ 0.88
RFC5P40937 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.53■□□□□ 0.88
RFC5P40937 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.53■□□□□ 0.88
RFC5P40937 AL136038.4-201ENST00000603606 1261 ntBASIC20.53■□□□□ 0.88
RFC5P40937 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.53■□□□□ 0.88
RFC5P40937 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RFC5P40937 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RFC5P40937 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RFC5P40937 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.53■□□□□ 0.88
RFC5P40937 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
RFC5P40937 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
RFC5P40937 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RFC5P40937 AC005332.1-201ENST00000577698 1310 ntBASIC20.53■□□□□ 0.88
RFC5P40937 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC5P40937 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC5P40937 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RFC5P40937 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC5P40937 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC5P40937 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.52■□□□□ 0.88
RFC5P40937 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC5P40937 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RFC5P40937 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.52■□□□□ 0.88
RFC5P40937 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC5P40937 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC5P40937 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
RFC5P40937 HLA-F-220ENST00000434407 884 ntBASIC20.52■□□□□ 0.88
RFC5P40937 SPDYE13P-201ENST00000445314 798 ntBASIC20.52■□□□□ 0.88
RFC5P40937 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.52■□□□□ 0.88
RFC5P40937 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RFC5P40937 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
RFC5P40937 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.52■□□□□ 0.87
RFC5P40937 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RFC5P40937 AL391807.1-203ENST00000604392 2365 ntBASIC20.51■□□□□ 0.87
RFC5P40937 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 IER3-202ENST00000376377 1350 ntBASIC20.51■□□□□ 0.87
RFC5P40937 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.51■□□□□ 0.87
RFC5P40937 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.51■□□□□ 0.87
RFC5P40937 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.51■□□□□ 0.87
RFC5P40937 AC116407.4-201ENST00000623319 1061 ntBASIC20.51■□□□□ 0.87
RFC5P40937 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RFC5P40937 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.51■□□□□ 0.87
RFC5P40937 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.51■□□□□ 0.87
RFC5P40937 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RFC5P40937 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.51■□□□□ 0.87
RFC5P40937 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.51■□□□□ 0.87
RFC5P40937 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
RFC5P40937 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RFC5P40937 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RFC5P40937 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RFC5P40937 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.5■□□□□ 0.87
RFC5P40937 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 PVRIG2P-201ENST00000435460 978 ntBASIC20.5■□□□□ 0.87
RFC5P40937 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.5■□□□□ 0.87
RFC5P40937 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
RFC5P40937 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.5■□□□□ 0.87
RFC5P40937 AC112777.1-201ENST00000540175 1423 ntBASIC20.5■□□□□ 0.87
RFC5P40937 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RFC5P40937 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RFC5P40937 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.49■□□□□ 0.87
RFC5P40937 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFC5P40937 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RFC5P40937 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.49■□□□□ 0.87
RFC5P40937 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms