Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RPA3P35244 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.84■□□□□ 0.61
RPA3P35244 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.84■□□□□ 0.61
RPA3P35244 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.84■□□□□ 0.61
RPA3P35244 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPA3P35244 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RPA3P35244 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
RPA3P35244 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
RPA3P35244 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPA3P35244 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPA3P35244 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
RPA3P35244 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPA3P35244 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPA3P35244 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.83■□□□□ 0.61
RPA3P35244 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RPA3P35244 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPA3P35244 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPA3P35244 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.83■□□□□ 0.6
RPA3P35244 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.83■□□□□ 0.6
RPA3P35244 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.83■□□□□ 0.6
RPA3P35244 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.83■□□□□ 0.6
RPA3P35244 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPA3P35244 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPA3P35244 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RPA3P35244 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.83■□□□□ 0.6
RPA3P35244 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.83■□□□□ 0.6
RPA3P35244 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RPA3P35244 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
RPA3P35244 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPA3P35244 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPA3P35244 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RPA3P35244 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RPA3P35244 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPA3P35244 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.82■□□□□ 0.6
RPA3P35244 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPA3P35244 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
RPA3P35244 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.82■□□□□ 0.6
RPA3P35244 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RPA3P35244 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.82■□□□□ 0.6
RPA3P35244 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RPA3P35244 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.82■□□□□ 0.6
RPA3P35244 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPA3P35244 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.82■□□□□ 0.6
RPA3P35244 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.82■□□□□ 0.6
RPA3P35244 C1QL1P1-201ENST00000568105 661 ntBASIC18.82■□□□□ 0.6
RPA3P35244 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.82■□□□□ 0.6
RPA3P35244 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPA3P35244 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RPA3P35244 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPA3P35244 AC138932.1-201ENST00000534164 6830 ntBASIC18.82■□□□□ 0.6
RPA3P35244 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RPA3P35244 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RPA3P35244 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.81■□□□□ 0.6
RPA3P35244 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.81■□□□□ 0.6
RPA3P35244 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.81■□□□□ 0.6
RPA3P35244 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.81■□□□□ 0.6
RPA3P35244 HTR7P1-201ENST00000538670 1336 ntBASIC18.81■□□□□ 0.6
RPA3P35244 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.81■□□□□ 0.6
RPA3P35244 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
RPA3P35244 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
RPA3P35244 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 TSPY21P-201ENST00000433481 731 ntBASIC18.81■□□□□ 0.6
RPA3P35244 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.81■□□□□ 0.6
RPA3P35244 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.81■□□□□ 0.6
RPA3P35244 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.81■□□□□ 0.6
RPA3P35244 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.81■□□□□ 0.6
RPA3P35244 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.81■□□□□ 0.6
RPA3P35244 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.81■□□□□ 0.6
RPA3P35244 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 AC135776.1-201ENST00000319817 2481 ntBASIC18.81■□□□□ 0.6
RPA3P35244 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
RPA3P35244 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.81■□□□□ 0.6
RPA3P35244 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.81■□□□□ 0.6
RPA3P35244 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RPA3P35244 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPA3P35244 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.8■□□□□ 0.6
RPA3P35244 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPA3P35244 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPA3P35244 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.8■□□□□ 0.6
RPA3P35244 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.8■□□□□ 0.6
RPA3P35244 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RPA3P35244 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPA3P35244 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.8■□□□□ 0.6
RPA3P35244 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RPA3P35244 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.8■□□□□ 0.6
RPA3P35244 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RPA3P35244 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms