Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LCN1P31025 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LCN1P31025 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.24■□□□□ 0.35
LCN1P31025 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LCN1P31025 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LCN1P31025 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.24■□□□□ 0.35
LCN1P31025 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCN1P31025 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.23■□□□□ 0.35
LCN1P31025 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCN1P31025 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LCN1P31025 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
LCN1P31025 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.23■□□□□ 0.35
LCN1P31025 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LCN1P31025 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.23■□□□□ 0.35
LCN1P31025 MIR564-202ENST00000385049 94 ntBASIC17.23■□□□□ 0.35
LCN1P31025 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.23■□□□□ 0.35
LCN1P31025 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.23■□□□□ 0.35
LCN1P31025 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.23■□□□□ 0.35
LCN1P31025 AL390955.1-201ENST00000428694 934 ntBASIC17.23■□□□□ 0.35
LCN1P31025 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.23■□□□□ 0.35
LCN1P31025 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.23■□□□□ 0.35
LCN1P31025 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.23■□□□□ 0.35
LCN1P31025 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.23■□□□□ 0.35
LCN1P31025 MIR3180-5-201ENST00000583743 153 ntBASIC17.23■□□□□ 0.35
LCN1P31025 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.23■□□□□ 0.35
LCN1P31025 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCN1P31025 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LCN1P31025 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.23■□□□□ 0.35
LCN1P31025 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LCN1P31025 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
LCN1P31025 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LCN1P31025 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LCN1P31025 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCN1P31025 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
LCN1P31025 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
LCN1P31025 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LCN1P31025 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.22■□□□□ 0.35
LCN1P31025 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCN1P31025 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.22■□□□□ 0.35
LCN1P31025 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCN1P31025 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCN1P31025 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCN1P31025 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCN1P31025 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCN1P31025 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
LCN1P31025 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.22■□□□□ 0.35
LCN1P31025 AC007663.1-201ENST00000438948 1240 ntBASIC17.22■□□□□ 0.35
LCN1P31025 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.22■□□□□ 0.35
LCN1P31025 AP003041.3-201ENST00000527151 707 ntBASIC17.22■□□□□ 0.35
LCN1P31025 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.22■□□□□ 0.35
LCN1P31025 WWOX-216ENST00000569818 525 ntBASIC17.22■□□□□ 0.35
LCN1P31025 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.22■□□□□ 0.35
LCN1P31025 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LCN1P31025 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.22■□□□□ 0.35
LCN1P31025 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LCN1P31025 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LCN1P31025 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
LCN1P31025 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCN1P31025 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.22■□□□□ 0.35
LCN1P31025 GPAT2P1-201ENST00000444924 1672 ntBASIC17.22■□□□□ 0.35
LCN1P31025 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LCN1P31025 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LCN1P31025 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LCN1P31025 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCN1P31025 KRT8P7-201ENST00000533003 1432 ntBASIC17.21■□□□□ 0.35
LCN1P31025 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LCN1P31025 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.21■□□□□ 0.35
LCN1P31025 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
LCN1P31025 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LCN1P31025 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCN1P31025 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCN1P31025 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LCN1P31025 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.21■□□□□ 0.35
LCN1P31025 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCN1P31025 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LCN1P31025 AP000593.1-201ENST00000393668 712 ntBASIC17.21■□□□□ 0.35
LCN1P31025 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.21■□□□□ 0.35
LCN1P31025 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.21■□□□□ 0.35
LCN1P31025 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LCN1P31025 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCN1P31025 ANO7L1-203ENST00000602586 1720 ntBASIC17.21■□□□□ 0.35
LCN1P31025 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LCN1P31025 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.34
LCN1P31025 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LCN1P31025 KRT8P45-201ENST00000414328 1447 ntBASIC17.21■□□□□ 0.34
LCN1P31025 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
LCN1P31025 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
LCN1P31025 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.34
LCN1P31025 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.21■□□□□ 0.34
LCN1P31025 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.2■□□□□ 0.34
LCN1P31025 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCN1P31025 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LCN1P31025 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCN1P31025 LTB4R2-202ENST00000528054 3092 ntBASIC17.2■□□□□ 0.34
LCN1P31025 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LCN1P31025 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms