Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VARSP26640 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.3■□□□□ 0.52
VARSP26640 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VARSP26640 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.3■□□□□ 0.52
VARSP26640 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.3■□□□□ 0.52
VARSP26640 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VARSP26640 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
VARSP26640 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.3■□□□□ 0.52
VARSP26640 AC018470.1-201ENST00000624790 3129 ntBASIC18.29■□□□□ 0.52
VARSP26640 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.29■□□□□ 0.52
VARSP26640 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.29■□□□□ 0.52
VARSP26640 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
VARSP26640 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.29■□□□□ 0.52
VARSP26640 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
VARSP26640 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.29■□□□□ 0.52
VARSP26640 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
VARSP26640 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 UNC93B2-201ENST00000285383 730 ntBASIC18.29■□□□□ 0.52
VARSP26640 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.29■□□□□ 0.52
VARSP26640 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.29■□□□□ 0.52
VARSP26640 KRT18P35-201ENST00000510488 1269 ntBASIC18.29■□□□□ 0.52
VARSP26640 RN7SL850P-201ENST00000579959 291 ntBASIC18.29■□□□□ 0.52
VARSP26640 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.29■□□□□ 0.52
VARSP26640 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.29■□□□□ 0.52
VARSP26640 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.29■□□□□ 0.52
VARSP26640 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VARSP26640 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VARSP26640 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 AL390961.4-201ENST00000623958 2535 ntBASIC18.28■□□□□ 0.52
VARSP26640 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.28■□□□□ 0.52
VARSP26640 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.28■□□□□ 0.52
VARSP26640 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.28■□□□□ 0.52
VARSP26640 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VARSP26640 AC090164.3-201ENST00000610780 2143 ntBASIC18.28■□□□□ 0.52
VARSP26640 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.28■□□□□ 0.52
VARSP26640 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
VARSP26640 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.28■□□□□ 0.52
VARSP26640 AC116562.2-201ENST00000507042 360 ntBASIC18.28■□□□□ 0.52
VARSP26640 PRSS44-201ENST00000515154 1146 ntBASIC18.28■□□□□ 0.52
VARSP26640 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.28■□□□□ 0.52
VARSP26640 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VARSP26640 REXO1L10P-201ENST00000615707 1290 ntBASIC18.28■□□□□ 0.52
VARSP26640 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.28■□□□□ 0.52
VARSP26640 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VARSP26640 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.28■□□□□ 0.52
VARSP26640 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.27■□□□□ 0.52
VARSP26640 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VARSP26640 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
VARSP26640 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VARSP26640 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VARSP26640 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VARSP26640 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
VARSP26640 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.27■□□□□ 0.52
VARSP26640 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.27■□□□□ 0.52
VARSP26640 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.27■□□□□ 0.52
VARSP26640 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.27■□□□□ 0.52
VARSP26640 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VARSP26640 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.27■□□□□ 0.52
VARSP26640 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.27■□□□□ 0.52
VARSP26640 AP000692.2-201ENST00000608391 879 ntBASIC18.27■□□□□ 0.52
VARSP26640 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.27■□□□□ 0.52
VARSP26640 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VARSP26640 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VARSP26640 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
VARSP26640 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
VARSP26640 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VARSP26640 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VARSP26640 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms