Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN3P26045 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN3P26045 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 INGX-201ENST00000359239 846 ntBASIC18.98■□□□□ 0.63
PTPN3P26045 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN3P26045 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN3P26045 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN3P26045 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN3P26045 AC116562.4-202ENST00000641738 218 ntBASIC18.98■□□□□ 0.63
PTPN3P26045 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PTPN3P26045 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN3P26045 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN3P26045 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PTPN3P26045 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN3P26045 MYLKP1-201ENST00000509077 1580 ntBASIC18.98■□□□□ 0.63
PTPN3P26045 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PTPN3P26045 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PTPN3P26045 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PTPN3P26045 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN3P26045 AC034236.2-201ENST00000606662 1610 ntBASIC18.97■□□□□ 0.63
PTPN3P26045 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PTPN3P26045 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN3P26045 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPN3P26045 AC010947.1-201ENST00000623454 693 ntBASIC18.97■□□□□ 0.63
PTPN3P26045 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.97■□□□□ 0.63
PTPN3P26045 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN3P26045 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PTPN3P26045 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN3P26045 AC135050.7-201ENST00000624508 2218 ntBASIC18.97■□□□□ 0.63
PTPN3P26045 BICD1-207ENST00000551848 1962 ntBASIC18.97■□□□□ 0.63
PTPN3P26045 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PTPN3P26045 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN3P26045 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN3P26045 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN3P26045 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.96■□□□□ 0.63
PTPN3P26045 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN3P26045 MMP23A-201ENST00000234610 1017 ntBASIC18.96■□□□□ 0.63
PTPN3P26045 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN3P26045 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN3P26045 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN3P26045 EGLN1P1-201ENST00000531623 762 ntBASIC18.96■□□□□ 0.63
PTPN3P26045 BX088651.1-201ENST00000540551 451 ntBASIC18.96■□□□□ 0.63
PTPN3P26045 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.96■□□□□ 0.63
PTPN3P26045 CR769767.2-201ENST00000622735 460 ntBASIC18.96■□□□□ 0.63
PTPN3P26045 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PTPN3P26045 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN3P26045 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN3P26045 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN3P26045 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
PTPN3P26045 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN3P26045 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PTPN3P26045 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
PTPN3P26045 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN3P26045 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.95■□□□□ 0.62
PTPN3P26045 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.95■□□□□ 0.62
PTPN3P26045 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN3P26045 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PTPN3P26045 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN3P26045 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN3P26045 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN3P26045 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms