Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.53■□□□□ 0.72
PDGFRAP16234 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.53■□□□□ 0.72
PDGFRAP16234 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PDGFRAP16234 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PDGFRAP16234 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFRAP16234 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFRAP16234 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFRAP16234 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PDGFRAP16234 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFRAP16234 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.52■□□□□ 0.72
PDGFRAP16234 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFRAP16234 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFRAP16234 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFRAP16234 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFRAP16234 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFRAP16234 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFRAP16234 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PDGFRAP16234 AC005521.1-201ENST00000393351 872 ntBASIC19.52■□□□□ 0.72
PDGFRAP16234 AC113347.1-201ENST00000413321 391 ntBASIC19.52■□□□□ 0.72
PDGFRAP16234 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
PDGFRAP16234 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
PDGFRAP16234 FAM87A-204ENST00000613235 858 ntBASIC19.52■□□□□ 0.72
PDGFRAP16234 AC036111.1-201ENST00000533973 1582 ntBASIC19.52■□□□□ 0.71
PDGFRAP16234 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDGFRAP16234 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
PDGFRAP16234 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.52■□□□□ 0.71
PDGFRAP16234 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDGFRAP16234 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.52■□□□□ 0.71
PDGFRAP16234 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 AC112777.1-201ENST00000540175 1423 ntBASIC19.51■□□□□ 0.71
PDGFRAP16234 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.51■□□□□ 0.71
PDGFRAP16234 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.51■□□□□ 0.71
PDGFRAP16234 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.51■□□□□ 0.71
PDGFRAP16234 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.51■□□□□ 0.71
PDGFRAP16234 MYC-208ENST00000641036 567 ntBASIC19.51■□□□□ 0.71
PDGFRAP16234 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PDGFRAP16234 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.51■□□□□ 0.71
PDGFRAP16234 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.51■□□□□ 0.71
PDGFRAP16234 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 RNF165-205ENST00000588679 2904 ntBASIC19.51■□□□□ 0.71
PDGFRAP16234 AC009113.1-201ENST00000570267 2443 ntBASIC19.51■□□□□ 0.71
PDGFRAP16234 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDGFRAP16234 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
PDGFRAP16234 KRT8P45-201ENST00000414328 1447 ntBASIC19.51■□□□□ 0.71
PDGFRAP16234 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
PDGFRAP16234 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.5■□□□□ 0.71
PDGFRAP16234 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.5■□□□□ 0.71
PDGFRAP16234 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PDGFRAP16234 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 AL137013.1-201ENST00000432946 1228 ntBASIC19.5■□□□□ 0.71
PDGFRAP16234 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.5■□□□□ 0.71
PDGFRAP16234 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.5■□□□□ 0.71
PDGFRAP16234 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 KRT18P57-201ENST00000443599 1254 ntBASIC19.5■□□□□ 0.71
PDGFRAP16234 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PDGFRAP16234 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.5■□□□□ 0.71
PDGFRAP16234 CR769767.2-201ENST00000622735 460 ntBASIC19.5■□□□□ 0.71
PDGFRAP16234 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.5■□□□□ 0.71
PDGFRAP16234 AC034236.2-201ENST00000606662 1610 ntBASIC19.5■□□□□ 0.71
PDGFRAP16234 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDGFRAP16234 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.5■□□□□ 0.71
PDGFRAP16234 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.5■□□□□ 0.71
PDGFRAP16234 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDGFRAP16234 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.5■□□□□ 0.71
PDGFRAP16234 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFRAP16234 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.49■□□□□ 0.71
PDGFRAP16234 AC090164.3-201ENST00000610780 2143 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms