Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.08■□□□□ 0.32
BMP4P12644 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BMP4P12644 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.08■□□□□ 0.32
BMP4P12644 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.08■□□□□ 0.32
BMP4P12644 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.08■□□□□ 0.32
BMP4P12644 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BMP4P12644 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.08■□□□□ 0.32
BMP4P12644 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
BMP4P12644 RPS2P55-201ENST00000397318 883 ntBASIC17.08■□□□□ 0.32
BMP4P12644 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BMP4P12644 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.08■□□□□ 0.32
BMP4P12644 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BMP4P12644 AC107956.1-201ENST00000494359 873 ntBASIC17.08■□□□□ 0.32
BMP4P12644 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.08■□□□□ 0.32
BMP4P12644 RARRES2P10-201ENST00000564312 460 ntBASIC17.08■□□□□ 0.32
BMP4P12644 AC004264.1-201ENST00000608354 794 ntBASIC17.08■□□□□ 0.32
BMP4P12644 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.08■□□□□ 0.32
BMP4P12644 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
BMP4P12644 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
BMP4P12644 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BMP4P12644 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.08■□□□□ 0.32
BMP4P12644 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
BMP4P12644 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BMP4P12644 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BMP4P12644 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BMP4P12644 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.08■□□□□ 0.32
BMP4P12644 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
BMP4P12644 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BMP4P12644 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
BMP4P12644 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
BMP4P12644 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
BMP4P12644 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.07■□□□□ 0.32
BMP4P12644 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
BMP4P12644 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.07■□□□□ 0.32
BMP4P12644 AC233702.5-201ENST00000584107 538 ntBASIC17.07■□□□□ 0.32
BMP4P12644 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BMP4P12644 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.07■□□□□ 0.32
BMP4P12644 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BMP4P12644 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
BMP4P12644 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.07■□□□□ 0.32
BMP4P12644 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BMP4P12644 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.06■□□□□ 0.32
BMP4P12644 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.06■□□□□ 0.32
BMP4P12644 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.06■□□□□ 0.32
BMP4P12644 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BMP4P12644 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.06■□□□□ 0.32
BMP4P12644 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 AC080080.1-201ENST00000625121 2420 ntBASIC17.06■□□□□ 0.32
BMP4P12644 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.06■□□□□ 0.32
BMP4P12644 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BMP4P12644 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.06■□□□□ 0.32
BMP4P12644 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
BMP4P12644 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.06■□□□□ 0.32
BMP4P12644 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.06■□□□□ 0.32
BMP4P12644 AL353807.1-201ENST00000427475 662 ntBASIC17.06■□□□□ 0.32
BMP4P12644 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.06■□□□□ 0.32
BMP4P12644 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.06■□□□□ 0.32
BMP4P12644 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.06■□□□□ 0.32
BMP4P12644 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 Z99916.2-201ENST00000604037 246 ntBASIC17.06■□□□□ 0.32
BMP4P12644 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.06■□□□□ 0.32
BMP4P12644 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BMP4P12644 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BMP4P12644 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BMP4P12644 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BMP4P12644 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms