Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRACP01848 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC12.13□□□□□ -0.47
TRACP01848 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRACP01848 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRACP01848 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TRACP01848 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC12.13□□□□□ -0.47
TRACP01848 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRACP01848 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TRACP01848 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRACP01848 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TRACP01848 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC12.13□□□□□ -0.47
TRACP01848 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC12.13□□□□□ -0.47
TRACP01848 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC12.13□□□□□ -0.47
TRACP01848 AC133561.4-201ENST00000566112 224 ntBASIC12.13□□□□□ -0.47
TRACP01848 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC12.13□□□□□ -0.47
TRACP01848 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC12.13□□□□□ -0.47
TRACP01848 MIR6724-1-201ENST00000616420 92 ntBASIC12.13□□□□□ -0.47
TRACP01848 MIR6724-2-201ENST00000616483 92 ntBASIC12.13□□□□□ -0.47
TRACP01848 MIR6724-4-201ENST00000617390 92 ntBASIC12.13□□□□□ -0.47
TRACP01848 MIR6724-3-201ENST00000622482 92 ntBASIC12.13□□□□□ -0.47
TRACP01848 AC136469.2-201ENST00000623944 1028 ntBASIC12.13□□□□□ -0.47
TRACP01848 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRACP01848 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.13□□□□□ -0.47
TRACP01848 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC12.13□□□□□ -0.47
TRACP01848 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRACP01848 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRACP01848 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TRACP01848 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRACP01848 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRACP01848 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRACP01848 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.13□□□□□ -0.47
TRACP01848 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TRACP01848 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRACP01848 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRACP01848 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRACP01848 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.13□□□□□ -0.47
TRACP01848 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TRACP01848 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TRACP01848 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TRACP01848 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
TRACP01848 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
TRACP01848 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC12.12□□□□□ -0.47
TRACP01848 AL023806.1-201ENST00000603994 1649 ntBASIC12.12□□□□□ -0.47
TRACP01848 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
TRACP01848 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
TRACP01848 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 SAPCD2P1-201ENST00000395413 1184 ntBASIC12.12□□□□□ -0.47
TRACP01848 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC12.12□□□□□ -0.47
TRACP01848 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC12.12□□□□□ -0.47
TRACP01848 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
TRACP01848 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC12.12□□□□□ -0.47
TRACP01848 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TRACP01848 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC12.12□□□□□ -0.47
TRACP01848 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 CICP6-201ENST00000457191 2729 ntBASIC12.12□□□□□ -0.47
TRACP01848 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.12□□□□□ -0.47
TRACP01848 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC12.12□□□□□ -0.47
TRACP01848 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TRACP01848 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TRACP01848 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
TRACP01848 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TRACP01848 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRACP01848 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRACP01848 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
TRACP01848 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRACP01848 FEM1AP3-201ENST00000403722 1741 ntBASIC12.11□□□□□ -0.47
TRACP01848 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC12.11□□□□□ -0.47
TRACP01848 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRACP01848 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.11□□□□□ -0.47
TRACP01848 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC12.11□□□□□ -0.47
TRACP01848 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.11□□□□□ -0.47
TRACP01848 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.11□□□□□ -0.47
TRACP01848 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.11□□□□□ -0.47
TRACP01848 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRACP01848 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRACP01848 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRACP01848 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.11□□□□□ -0.47
TRACP01848 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms