Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP3BO95985 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.07■□□□□ 0.64
TOP3BO95985 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TOP3BO95985 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.07■□□□□ 0.64
TOP3BO95985 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.07■□□□□ 0.64
TOP3BO95985 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TOP3BO95985 AL121956.5-201ENST00000625261 221 ntBASIC19.07■□□□□ 0.64
TOP3BO95985 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP3BO95985 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP3BO95985 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP3BO95985 AC020763.4-201ENST00000623414 4170 ntBASIC19.07■□□□□ 0.64
TOP3BO95985 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP3BO95985 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP3BO95985 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP3BO95985 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.07■□□□□ 0.64
TOP3BO95985 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP3BO95985 KRT8P8-201ENST00000434750 1448 ntBASIC19.07■□□□□ 0.64
TOP3BO95985 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.07■□□□□ 0.64
TOP3BO95985 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TOP3BO95985 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TOP3BO95985 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.06■□□□□ 0.64
TOP3BO95985 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.06■□□□□ 0.64
TOP3BO95985 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TOP3BO95985 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.06■□□□□ 0.64
TOP3BO95985 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.06■□□□□ 0.64
TOP3BO95985 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TOP3BO95985 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
TOP3BO95985 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TOP3BO95985 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.06■□□□□ 0.64
TOP3BO95985 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.06■□□□□ 0.64
TOP3BO95985 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.06■□□□□ 0.64
TOP3BO95985 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.06■□□□□ 0.64
TOP3BO95985 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TOP3BO95985 AL133373.2-201ENST00000623187 2828 ntBASIC19.06■□□□□ 0.64
TOP3BO95985 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TOP3BO95985 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.05■□□□□ 0.64
TOP3BO95985 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.05■□□□□ 0.64
TOP3BO95985 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
TOP3BO95985 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.05■□□□□ 0.64
TOP3BO95985 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.05■□□□□ 0.64
TOP3BO95985 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 HMGA1P5-201ENST00000412453 271 ntBASIC19.05■□□□□ 0.64
TOP3BO95985 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 PVRIG2P-201ENST00000435460 978 ntBASIC19.05■□□□□ 0.64
TOP3BO95985 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.05■□□□□ 0.64
TOP3BO95985 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.05■□□□□ 0.64
TOP3BO95985 YBX1P10-201ENST00000444752 975 ntBASIC19.05■□□□□ 0.64
TOP3BO95985 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.05■□□□□ 0.64
TOP3BO95985 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.05■□□□□ 0.64
TOP3BO95985 AC011558.1-201ENST00000623459 338 ntBASIC19.05■□□□□ 0.64
TOP3BO95985 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.05■□□□□ 0.64
TOP3BO95985 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TOP3BO95985 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.05■□□□□ 0.64
TOP3BO95985 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.05■□□□□ 0.64
TOP3BO95985 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TOP3BO95985 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.04■□□□□ 0.64
TOP3BO95985 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TOP3BO95985 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.04■□□□□ 0.64
TOP3BO95985 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TOP3BO95985 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms