Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC24.65■■□□□ 1.54
LTN1O94822 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.65■■□□□ 1.54
LTN1O94822 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LTN1O94822 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
LTN1O94822 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
LTN1O94822 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
LTN1O94822 MIR149-201ENST00000384879 89 ntBASIC24.65■■□□□ 1.54
LTN1O94822 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC24.65■■□□□ 1.54
LTN1O94822 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC24.65■■□□□ 1.54
LTN1O94822 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC24.65■■□□□ 1.54
LTN1O94822 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC24.65■■□□□ 1.54
LTN1O94822 CCNC-219ENST00000627680 896 ntTSL 5 BASIC24.65■■□□□ 1.54
LTN1O94822 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
LTN1O94822 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
LTN1O94822 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
LTN1O94822 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC24.64■■□□□ 1.54
LTN1O94822 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC24.64■■□□□ 1.54
LTN1O94822 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
LTN1O94822 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC24.64■■□□□ 1.53
LTN1O94822 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
LTN1O94822 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LTN1O94822 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LTN1O94822 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC24.64■■□□□ 1.53
LTN1O94822 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC24.64■■□□□ 1.53
LTN1O94822 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC24.64■■□□□ 1.53
LTN1O94822 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC24.64■■□□□ 1.53
LTN1O94822 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LTN1O94822 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LTN1O94822 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LTN1O94822 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LTN1O94822 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC24.64■■□□□ 1.53
LTN1O94822 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
LTN1O94822 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC24.63■■□□□ 1.53
LTN1O94822 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
LTN1O94822 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
LTN1O94822 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LTN1O94822 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC24.63■■□□□ 1.53
LTN1O94822 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC24.63■■□□□ 1.53
LTN1O94822 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC24.63■■□□□ 1.53
LTN1O94822 AL032819.2-201ENST00000624543 2162 ntBASIC24.63■■□□□ 1.53
LTN1O94822 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
LTN1O94822 IL9RP2-201ENST00000423948 1312 ntBASIC24.63■■□□□ 1.53
LTN1O94822 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
LTN1O94822 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
LTN1O94822 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
LTN1O94822 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 AL161938.1-201ENST00000569833 2180 ntBASIC24.62■■□□□ 1.53
LTN1O94822 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
LTN1O94822 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
LTN1O94822 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC24.62■■□□□ 1.53
LTN1O94822 CALM3-211ENST00000598871 561 ntTSL 4 BASIC24.62■■□□□ 1.53
LTN1O94822 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
LTN1O94822 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC24.62■■□□□ 1.53
LTN1O94822 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 AL049812.1-201ENST00000432563 2267 ntBASIC24.62■■□□□ 1.53
LTN1O94822 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC24.62■■□□□ 1.53
LTN1O94822 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 PPIE-208ENST00000470213 927 ntTSL 3 BASIC24.62■■□□□ 1.53
LTN1O94822 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC24.62■■□□□ 1.53
LTN1O94822 IGHV3-41-201ENST00000613121 348 ntBASIC24.62■■□□□ 1.53
LTN1O94822 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
LTN1O94822 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
LTN1O94822 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LTN1O94822 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC24.62■■□□□ 1.53
LTN1O94822 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
LTN1O94822 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LTN1O94822 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
LTN1O94822 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LTN1O94822 AC243591.1-201ENST00000452967 1364 ntBASIC24.61■■□□□ 1.53
LTN1O94822 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LTN1O94822 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LTN1O94822 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LTN1O94822 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC24.61■■□□□ 1.53
LTN1O94822 DFFB-203ENST00000341385 572 ntTSL 5 BASIC24.61■■□□□ 1.53
LTN1O94822 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
LTN1O94822 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LTN1O94822 SLC25A1P1-201ENST00000528351 927 ntBASIC24.61■■□□□ 1.53
LTN1O94822 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
LTN1O94822 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC24.61■■□□□ 1.53
LTN1O94822 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LTN1O94822 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LTN1O94822 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
LTN1O94822 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC24.6■■□□□ 1.53
LTN1O94822 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LTN1O94822 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LTN1O94822 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
LTN1O94822 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
LTN1O94822 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LTN1O94822 DDT-203ENST00000403754 569 ntTSL 3 BASIC24.6■■□□□ 1.53
LTN1O94822 DDT-206ENST00000430101 573 ntTSL 2 BASIC24.6■■□□□ 1.53
LTN1O94822 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LTN1O94822 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms