Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NDUFS3O75489 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.58■□□□□ 0.56
NDUFS3O75489 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NDUFS3O75489 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NDUFS3O75489 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.58■□□□□ 0.56
NDUFS3O75489 GPAT2P1-201ENST00000444924 1672 ntBASIC18.57■□□□□ 0.56
NDUFS3O75489 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.57■□□□□ 0.56
NDUFS3O75489 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.57■□□□□ 0.56
NDUFS3O75489 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.57■□□□□ 0.56
NDUFS3O75489 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.57■□□□□ 0.56
NDUFS3O75489 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.57■□□□□ 0.56
NDUFS3O75489 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.57■□□□□ 0.56
NDUFS3O75489 AL390955.1-201ENST00000428694 934 ntBASIC18.57■□□□□ 0.56
NDUFS3O75489 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.57■□□□□ 0.56
NDUFS3O75489 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NDUFS3O75489 FITM1-202ENST00000559294 800 ntBASIC18.57■□□□□ 0.56
NDUFS3O75489 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.57■□□□□ 0.56
NDUFS3O75489 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
NDUFS3O75489 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NDUFS3O75489 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 AC112777.1-201ENST00000540175 1423 ntBASIC18.57■□□□□ 0.56
NDUFS3O75489 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 AC009113.1-201ENST00000570267 2443 ntBASIC18.57■□□□□ 0.56
NDUFS3O75489 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NDUFS3O75489 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.56■□□□□ 0.56
NDUFS3O75489 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NDUFS3O75489 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.56■□□□□ 0.56
NDUFS3O75489 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
NDUFS3O75489 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NDUFS3O75489 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.56■□□□□ 0.56
NDUFS3O75489 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
NDUFS3O75489 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NDUFS3O75489 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.56■□□□□ 0.56
NDUFS3O75489 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.56■□□□□ 0.56
NDUFS3O75489 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.56■□□□□ 0.56
NDUFS3O75489 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.56■□□□□ 0.56
NDUFS3O75489 SLC25A1P2-201ENST00000430693 912 ntBASIC18.56■□□□□ 0.56
NDUFS3O75489 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.56■□□□□ 0.56
NDUFS3O75489 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NDUFS3O75489 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.56■□□□□ 0.56
NDUFS3O75489 AL499627.1-201ENST00000569373 2188 ntBASIC18.56■□□□□ 0.56
NDUFS3O75489 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.56■□□□□ 0.56
NDUFS3O75489 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.56■□□□□ 0.56
NDUFS3O75489 AC126763.1-201ENST00000552015 2118 ntBASIC18.56■□□□□ 0.56
NDUFS3O75489 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NDUFS3O75489 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.56■□□□□ 0.56
NDUFS3O75489 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
NDUFS3O75489 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.55■□□□□ 0.56
NDUFS3O75489 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.55■□□□□ 0.56
NDUFS3O75489 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 TSPY17P-201ENST00000450329 467 ntBASIC18.55■□□□□ 0.56
NDUFS3O75489 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.55■□□□□ 0.56
NDUFS3O75489 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.55■□□□□ 0.56
NDUFS3O75489 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.55■□□□□ 0.56
NDUFS3O75489 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
NDUFS3O75489 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NDUFS3O75489 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.55■□□□□ 0.56
NDUFS3O75489 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NDUFS3O75489 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NDUFS3O75489 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NDUFS3O75489 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms