Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 Z98044.1-201ENST00000632503 1764 ntBASIC19.42■□□□□ 0.7
OPHN1O60890 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
OPHN1O60890 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
OPHN1O60890 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
OPHN1O60890 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 TSPY14P-201ENST00000303979 915 ntBASIC19.42■□□□□ 0.7
OPHN1O60890 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
OPHN1O60890 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
OPHN1O60890 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.42■□□□□ 0.7
OPHN1O60890 AC004980.1-204ENST00000429707 299 ntBASIC19.42■□□□□ 0.7
OPHN1O60890 BX664615.1-201ENST00000443558 458 ntBASIC19.42■□□□□ 0.7
OPHN1O60890 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.42■□□□□ 0.7
OPHN1O60890 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.42■□□□□ 0.7
OPHN1O60890 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.42■□□□□ 0.7
OPHN1O60890 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.42■□□□□ 0.7
OPHN1O60890 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.42■□□□□ 0.7
OPHN1O60890 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
OPHN1O60890 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.42■□□□□ 0.7
OPHN1O60890 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
OPHN1O60890 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
OPHN1O60890 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
OPHN1O60890 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
OPHN1O60890 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
OPHN1O60890 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
OPHN1O60890 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.41■□□□□ 0.7
OPHN1O60890 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
OPHN1O60890 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.41■□□□□ 0.7
OPHN1O60890 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
OPHN1O60890 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
OPHN1O60890 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
OPHN1O60890 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
OPHN1O60890 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
OPHN1O60890 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.41■□□□□ 0.7
OPHN1O60890 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.41■□□□□ 0.7
OPHN1O60890 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.41■□□□□ 0.7
OPHN1O60890 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.41■□□□□ 0.7
OPHN1O60890 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.41■□□□□ 0.7
OPHN1O60890 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.41■□□□□ 0.7
OPHN1O60890 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
OPHN1O60890 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
OPHN1O60890 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
OPHN1O60890 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
OPHN1O60890 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.41■□□□□ 0.7
OPHN1O60890 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.4■□□□□ 0.7
OPHN1O60890 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
OPHN1O60890 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.4■□□□□ 0.7
OPHN1O60890 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.4■□□□□ 0.7
OPHN1O60890 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.4■□□□□ 0.7
OPHN1O60890 AC022616.7-201ENST00000525383 220 ntBASIC19.4■□□□□ 0.7
OPHN1O60890 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.4■□□□□ 0.7
OPHN1O60890 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.4■□□□□ 0.7
OPHN1O60890 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.4■□□□□ 0.7
OPHN1O60890 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
OPHN1O60890 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 AC005082.1-201ENST00000413042 2259 ntBASIC19.4■□□□□ 0.7
OPHN1O60890 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
OPHN1O60890 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.4■□□□□ 0.7
OPHN1O60890 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
OPHN1O60890 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
OPHN1O60890 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.39■□□□□ 0.7
OPHN1O60890 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
OPHN1O60890 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
OPHN1O60890 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
OPHN1O60890 AL512353.2-201ENST00000448759 1962 ntBASIC19.39■□□□□ 0.7
OPHN1O60890 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.39■□□□□ 0.69
OPHN1O60890 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPHN1O60890 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.39■□□□□ 0.69
OPHN1O60890 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPHN1O60890 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
OPHN1O60890 MESTP1-201ENST00000404287 994 ntBASIC19.39■□□□□ 0.69
OPHN1O60890 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.39■□□□□ 0.69
OPHN1O60890 CRYGFP-201ENST00000418459 633 ntBASIC19.39■□□□□ 0.69
OPHN1O60890 AC097488.1-201ENST00000507834 756 ntBASIC19.39■□□□□ 0.69
OPHN1O60890 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.39■□□□□ 0.69
OPHN1O60890 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.39■□□□□ 0.69
OPHN1O60890 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
OPHN1O60890 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.39■□□□□ 0.69
OPHN1O60890 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.39■□□□□ 0.69
OPHN1O60890 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
OPHN1O60890 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms