Protein–RNA interactions for Protein: O60869

EDF1, Endothelial differentiation-related factor 1, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1O60869 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.33■□□□□ 0.52
EDF1O60869 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.33■□□□□ 0.52
EDF1O60869 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EDF1O60869 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EDF1O60869 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.33■□□□□ 0.52
EDF1O60869 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.33■□□□□ 0.52
EDF1O60869 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
EDF1O60869 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EDF1O60869 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EDF1O60869 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EDF1O60869 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.33■□□□□ 0.52
EDF1O60869 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EDF1O60869 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EDF1O60869 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EDF1O60869 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
EDF1O60869 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.32■□□□□ 0.52
EDF1O60869 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 AC141586.5-201ENST00000624546 2050 ntBASIC18.32■□□□□ 0.52
EDF1O60869 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.32■□□□□ 0.52
EDF1O60869 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 TNRC18P3-201ENST00000441896 2691 ntBASIC18.32■□□□□ 0.52
EDF1O60869 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
EDF1O60869 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
EDF1O60869 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
EDF1O60869 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.32■□□□□ 0.52
EDF1O60869 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
EDF1O60869 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.32■□□□□ 0.52
EDF1O60869 KRT18P5-201ENST00000436075 1291 ntBASIC18.32■□□□□ 0.52
EDF1O60869 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.32■□□□□ 0.52
EDF1O60869 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.32■□□□□ 0.52
EDF1O60869 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
EDF1O60869 AL121829.2-201ENST00000620908 328 ntBASIC18.32■□□□□ 0.52
EDF1O60869 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.32■□□□□ 0.52
EDF1O60869 HLA-A-209ENST00000638375 975 ntBASIC18.32■□□□□ 0.52
EDF1O60869 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.32■□□□□ 0.52
EDF1O60869 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.32■□□□□ 0.52
EDF1O60869 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 KRT8P41-201ENST00000533985 1514 ntBASIC18.32■□□□□ 0.52
EDF1O60869 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 HTR7P1-202ENST00000624664 4411 ntBASIC18.32■□□□□ 0.52
EDF1O60869 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
EDF1O60869 AD000864.1-201ENST00000624076 2295 ntBASIC18.32■□□□□ 0.52
EDF1O60869 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.31■□□□□ 0.52
EDF1O60869 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
EDF1O60869 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.31■□□□□ 0.52
EDF1O60869 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.31■□□□□ 0.52
EDF1O60869 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
EDF1O60869 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 AC138932.1-201ENST00000534164 6830 ntBASIC18.31■□□□□ 0.52
EDF1O60869 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.31■□□□□ 0.52
EDF1O60869 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.31■□□□□ 0.52
EDF1O60869 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
EDF1O60869 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.31■□□□□ 0.52
EDF1O60869 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.31■□□□□ 0.52
EDF1O60869 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.31■□□□□ 0.52
EDF1O60869 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.31■□□□□ 0.52
EDF1O60869 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
EDF1O60869 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
EDF1O60869 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
EDF1O60869 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
EDF1O60869 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.31■□□□□ 0.52
EDF1O60869 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EDF1O60869 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EDF1O60869 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EDF1O60869 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
EDF1O60869 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.3■□□□□ 0.52
EDF1O60869 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
EDF1O60869 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.3■□□□□ 0.52
EDF1O60869 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
EDF1O60869 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.3■□□□□ 0.52
EDF1O60869 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
EDF1O60869 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
EDF1O60869 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms