Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.45□□□□□ -0.1
PDE6DO43924 AL589743.5-201ENST00000616611 1050 ntBASIC14.45□□□□□ -0.1
PDE6DO43924 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PDE6DO43924 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDE6DO43924 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.45□□□□□ -0.1
PDE6DO43924 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PDE6DO43924 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDE6DO43924 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.45□□□□□ -0.1
PDE6DO43924 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.45□□□□□ -0.1
PDE6DO43924 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PDE6DO43924 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PDE6DO43924 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.44□□□□□ -0.1
PDE6DO43924 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.44□□□□□ -0.1
PDE6DO43924 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.44□□□□□ -0.1
PDE6DO43924 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.44□□□□□ -0.1
PDE6DO43924 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PDE6DO43924 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.44□□□□□ -0.1
PDE6DO43924 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
PDE6DO43924 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 AC096631.2-201ENST00000436136 790 ntBASIC14.44□□□□□ -0.1
PDE6DO43924 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.44□□□□□ -0.1
PDE6DO43924 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.44□□□□□ -0.1
PDE6DO43924 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC14.44□□□□□ -0.1
PDE6DO43924 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.44□□□□□ -0.1
PDE6DO43924 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PDE6DO43924 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.44□□□□□ -0.1
PDE6DO43924 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.44□□□□□ -0.1
PDE6DO43924 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PDE6DO43924 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PDE6DO43924 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 AC112777.1-201ENST00000540175 1423 ntBASIC14.43□□□□□ -0.1
PDE6DO43924 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PDE6DO43924 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
PDE6DO43924 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.43□□□□□ -0.1
PDE6DO43924 REXO1L9P-201ENST00000604264 2108 ntBASIC14.43□□□□□ -0.1
PDE6DO43924 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.43□□□□□ -0.1
PDE6DO43924 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.43□□□□□ -0.1
PDE6DO43924 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.43□□□□□ -0.1
PDE6DO43924 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.43□□□□□ -0.1
PDE6DO43924 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
PDE6DO43924 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PDE6DO43924 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PDE6DO43924 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.43□□□□□ -0.1
PDE6DO43924 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PDE6DO43924 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC14.43□□□□□ -0.1
PDE6DO43924 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PDE6DO43924 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.42□□□□□ -0.1
PDE6DO43924 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC14.42□□□□□ -0.1
PDE6DO43924 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.42□□□□□ -0.1
PDE6DO43924 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.42□□□□□ -0.1
PDE6DO43924 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.42□□□□□ -0.1
PDE6DO43924 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.42□□□□□ -0.1
PDE6DO43924 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PDE6DO43924 AC123595.1-201ENST00000440769 1046 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms