Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ACTN4O43707 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ACTN4O43707 AC097488.1-201ENST00000507834 756 ntBASIC20.9■□□□□ 0.94
ACTN4O43707 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.9■□□□□ 0.94
ACTN4O43707 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.9■□□□□ 0.94
ACTN4O43707 Z99916.2-201ENST00000604037 246 ntBASIC20.9■□□□□ 0.94
ACTN4O43707 AC135776.1-201ENST00000319817 2481 ntBASIC20.9■□□□□ 0.94
ACTN4O43707 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.9■□□□□ 0.94
ACTN4O43707 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ACTN4O43707 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.9■□□□□ 0.94
ACTN4O43707 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.9■□□□□ 0.94
ACTN4O43707 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ACTN4O43707 MYLKP1-201ENST00000509077 1580 ntBASIC20.89■□□□□ 0.94
ACTN4O43707 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ACTN4O43707 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.89■□□□□ 0.94
ACTN4O43707 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
ACTN4O43707 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACTN4O43707 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACTN4O43707 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ACTN4O43707 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.89■□□□□ 0.93
ACTN4O43707 MIR564-202ENST00000385049 94 ntBASIC20.89■□□□□ 0.93
ACTN4O43707 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACTN4O43707 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.89■□□□□ 0.93
ACTN4O43707 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.89■□□□□ 0.93
ACTN4O43707 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.89■□□□□ 0.93
ACTN4O43707 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.89■□□□□ 0.93
ACTN4O43707 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.89■□□□□ 0.93
ACTN4O43707 MIR4674-201ENST00000582457 87 ntBASIC20.89■□□□□ 0.93
ACTN4O43707 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.89■□□□□ 0.93
ACTN4O43707 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACTN4O43707 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACTN4O43707 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ACTN4O43707 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACTN4O43707 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.89■□□□□ 0.93
ACTN4O43707 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACTN4O43707 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACTN4O43707 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ACTN4O43707 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.89■□□□□ 0.93
ACTN4O43707 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.89■□□□□ 0.93
ACTN4O43707 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ACTN4O43707 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ACTN4O43707 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACTN4O43707 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACTN4O43707 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 NOC2LP2-201ENST00000407594 1944 ntBASIC20.88■□□□□ 0.93
ACTN4O43707 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACTN4O43707 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ACTN4O43707 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACTN4O43707 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.88■□□□□ 0.93
ACTN4O43707 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACTN4O43707 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.88■□□□□ 0.93
ACTN4O43707 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.88■□□□□ 0.93
ACTN4O43707 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ACTN4O43707 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.88■□□□□ 0.93
ACTN4O43707 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.88■□□□□ 0.93
ACTN4O43707 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.88■□□□□ 0.93
ACTN4O43707 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.88■□□□□ 0.93
ACTN4O43707 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACTN4O43707 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ACTN4O43707 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
ACTN4O43707 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ACTN4O43707 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.87■□□□□ 0.93
ACTN4O43707 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
ACTN4O43707 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
ACTN4O43707 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.87■□□□□ 0.93
ACTN4O43707 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.87■□□□□ 0.93
ACTN4O43707 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.87■□□□□ 0.93
ACTN4O43707 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ACTN4O43707 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.87■□□□□ 0.93
ACTN4O43707 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ACTN4O43707 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
ACTN4O43707 AC093677.2-201ENST00000600169 1863 ntBASIC20.86■□□□□ 0.93
ACTN4O43707 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACTN4O43707 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ACTN4O43707 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ACTN4O43707 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ACTN4O43707 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ACTN4O43707 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.86■□□□□ 0.93
ACTN4O43707 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms