Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 AC034232.1-201ENST00000506026 1064 ntBASIC19.92■□□□□ 0.78
SPTLC1O15269 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.92■□□□□ 0.78
SPTLC1O15269 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC1O15269 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.92■□□□□ 0.78
SPTLC1O15269 AC010240.3-201ENST00000607688 395 ntBASIC19.92■□□□□ 0.78
SPTLC1O15269 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
SPTLC1O15269 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.92■□□□□ 0.78
SPTLC1O15269 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC1O15269 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPTLC1O15269 KRT8P7-201ENST00000533003 1432 ntBASIC19.92■□□□□ 0.78
SPTLC1O15269 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.92■□□□□ 0.78
SPTLC1O15269 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SPTLC1O15269 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SPTLC1O15269 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
SPTLC1O15269 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.91■□□□□ 0.78
SPTLC1O15269 DUSP5P1-201ENST00000441325 1139 ntBASIC19.91■□□□□ 0.78
SPTLC1O15269 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.91■□□□□ 0.78
SPTLC1O15269 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.91■□□□□ 0.78
SPTLC1O15269 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.91■□□□□ 0.78
SPTLC1O15269 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.91■□□□□ 0.78
SPTLC1O15269 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.91■□□□□ 0.78
SPTLC1O15269 ZNF444P1-201ENST00000559497 298 ntBASIC19.91■□□□□ 0.78
SPTLC1O15269 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.91■□□□□ 0.78
SPTLC1O15269 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.91■□□□□ 0.78
SPTLC1O15269 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 AC005332.1-201ENST00000577698 1310 ntBASIC19.91■□□□□ 0.78
SPTLC1O15269 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SPTLC1O15269 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.9■□□□□ 0.78
SPTLC1O15269 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.9■□□□□ 0.78
SPTLC1O15269 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SPTLC1O15269 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SPTLC1O15269 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SPTLC1O15269 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 PCED1CP-201ENST00000419887 785 ntBASIC19.9■□□□□ 0.78
SPTLC1O15269 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 VENTXP5-201ENST00000523979 775 ntBASIC19.9■□□□□ 0.78
SPTLC1O15269 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.9■□□□□ 0.78
SPTLC1O15269 AL136038.3-201ENST00000561909 1096 ntBASIC19.9■□□□□ 0.78
SPTLC1O15269 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
SPTLC1O15269 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.9■□□□□ 0.78
SPTLC1O15269 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.9■□□□□ 0.78
SPTLC1O15269 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.9■□□□□ 0.78
SPTLC1O15269 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
SPTLC1O15269 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SPTLC1O15269 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SPTLC1O15269 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.9■□□□□ 0.78
SPTLC1O15269 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.9■□□□□ 0.78
SPTLC1O15269 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.9■□□□□ 0.78
SPTLC1O15269 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SPTLC1O15269 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.9■□□□□ 0.78
SPTLC1O15269 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPTLC1O15269 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SPTLC1O15269 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTLC1O15269 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTLC1O15269 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTLC1O15269 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.89■□□□□ 0.77
SPTLC1O15269 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SPTLC1O15269 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SPTLC1O15269 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTLC1O15269 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTLC1O15269 KRT8P50-201ENST00000562022 1438 ntBASIC19.89■□□□□ 0.77
SPTLC1O15269 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.89■□□□□ 0.77
SPTLC1O15269 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SPTLC1O15269 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPTLC1O15269 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms