Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3D1O14617 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3D1O14617 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3D1O14617 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.43■□□□□ 0.38
AP3D1O14617 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
AP3D1O14617 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.43■□□□□ 0.38
AP3D1O14617 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
AP3D1O14617 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
AP3D1O14617 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
AP3D1O14617 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
AP3D1O14617 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
AP3D1O14617 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
AP3D1O14617 AL353807.1-201ENST00000427475 662 ntBASIC17.42■□□□□ 0.38
AP3D1O14617 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3D1O14617 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3D1O14617 GCSHP5-201ENST00000443090 522 ntBASIC17.42■□□□□ 0.38
AP3D1O14617 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3D1O14617 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3D1O14617 RARRES2P10-201ENST00000564312 460 ntBASIC17.42■□□□□ 0.38
AP3D1O14617 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.42■□□□□ 0.38
AP3D1O14617 CR392000.1-201ENST00000624770 1228 ntBASIC17.42■□□□□ 0.38
AP3D1O14617 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
AP3D1O14617 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
AP3D1O14617 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
AP3D1O14617 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
AP3D1O14617 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.42■□□□□ 0.38
AP3D1O14617 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.42■□□□□ 0.38
AP3D1O14617 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
AP3D1O14617 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.41■□□□□ 0.38
AP3D1O14617 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 KRT16P1-201ENST00000399124 1418 ntBASIC17.41■□□□□ 0.38
AP3D1O14617 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3D1O14617 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
AP3D1O14617 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.41■□□□□ 0.38
AP3D1O14617 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.41■□□□□ 0.38
AP3D1O14617 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3D1O14617 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.41■□□□□ 0.38
AP3D1O14617 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3D1O14617 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.41■□□□□ 0.38
AP3D1O14617 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.41■□□□□ 0.38
AP3D1O14617 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3D1O14617 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
AP3D1O14617 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.41■□□□□ 0.38
AP3D1O14617 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.41■□□□□ 0.38
AP3D1O14617 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.41■□□□□ 0.38
AP3D1O14617 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
AP3D1O14617 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.41■□□□□ 0.38
AP3D1O14617 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
AP3D1O14617 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3D1O14617 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
AP3D1O14617 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3D1O14617 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 AL390961.4-201ENST00000623958 2535 ntBASIC17.4■□□□□ 0.38
AP3D1O14617 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.4■□□□□ 0.38
AP3D1O14617 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.4■□□□□ 0.38
AP3D1O14617 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.4■□□□□ 0.38
AP3D1O14617 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
AP3D1O14617 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.4■□□□□ 0.38
AP3D1O14617 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms