Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 AC008556.1-201ENST00000610908 2040 ntBASIC14.05□□□□□ -0.16
SOCS3O14543 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.05□□□□□ -0.16
SOCS3O14543 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SOCS3O14543 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.05□□□□□ -0.16
SOCS3O14543 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.05□□□□□ -0.16
SOCS3O14543 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.05□□□□□ -0.16
SOCS3O14543 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SOCS3O14543 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 CA15P1-201ENST00000481698 905 ntBASIC14.05□□□□□ -0.16
SOCS3O14543 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.05□□□□□ -0.16
SOCS3O14543 AC097488.1-201ENST00000507834 756 ntBASIC14.05□□□□□ -0.16
SOCS3O14543 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.05□□□□□ -0.16
SOCS3O14543 KRT18P41-201ENST00000518924 1277 ntBASIC14.05□□□□□ -0.16
SOCS3O14543 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.05□□□□□ -0.16
SOCS3O14543 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.05□□□□□ -0.16
SOCS3O14543 AC026471.5-201ENST00000615068 467 ntBASIC14.05□□□□□ -0.16
SOCS3O14543 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.05□□□□□ -0.16
SOCS3O14543 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SOCS3O14543 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.05□□□□□ -0.16
SOCS3O14543 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.05□□□□□ -0.16
SOCS3O14543 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.05□□□□□ -0.16
SOCS3O14543 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SOCS3O14543 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SOCS3O14543 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.04□□□□□ -0.16
SOCS3O14543 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.04□□□□□ -0.16
SOCS3O14543 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.04□□□□□ -0.16
SOCS3O14543 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SOCS3O14543 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SOCS3O14543 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC14.04□□□□□ -0.16
SOCS3O14543 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 AL023284.2-201ENST00000405850 579 ntBASIC14.04□□□□□ -0.16
SOCS3O14543 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 AL355355.2-201ENST00000442321 338 ntBASIC14.04□□□□□ -0.16
SOCS3O14543 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.04□□□□□ -0.16
SOCS3O14543 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.04□□□□□ -0.16
SOCS3O14543 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.04□□□□□ -0.16
SOCS3O14543 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.04□□□□□ -0.16
SOCS3O14543 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.04□□□□□ -0.16
SOCS3O14543 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.04□□□□□ -0.16
SOCS3O14543 AP005242.2-201ENST00000580065 1175 ntBASIC14.04□□□□□ -0.16
SOCS3O14543 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
SOCS3O14543 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.04□□□□□ -0.16
SOCS3O14543 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SOCS3O14543 AL390961.4-201ENST00000623958 2535 ntBASIC14.04□□□□□ -0.16
SOCS3O14543 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SOCS3O14543 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SOCS3O14543 GPAT2P1-201ENST00000444924 1672 ntBASIC14.04□□□□□ -0.16
SOCS3O14543 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SOCS3O14543 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SOCS3O14543 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SOCS3O14543 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SOCS3O14543 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SOCS3O14543 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SOCS3O14543 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.03□□□□□ -0.16
SOCS3O14543 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SOCS3O14543 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.03□□□□□ -0.16
SOCS3O14543 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SOCS3O14543 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SOCS3O14543 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.03□□□□□ -0.16
SOCS3O14543 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SOCS3O14543 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SOCS3O14543 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms