Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA4O00483 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA4O00483 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA4O00483 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NDUFA4O00483 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA4O00483 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA4O00483 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA4O00483 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA4O00483 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.29□□□□□ -0.12
NDUFA4O00483 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA4O00483 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NDUFA4O00483 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
NDUFA4O00483 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NDUFA4O00483 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
NDUFA4O00483 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
NDUFA4O00483 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NDUFA4O00483 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
NDUFA4O00483 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.28□□□□□ -0.12
NDUFA4O00483 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC14.28□□□□□ -0.12
NDUFA4O00483 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
NDUFA4O00483 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.28□□□□□ -0.12
NDUFA4O00483 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA4O00483 AC036111.1-201ENST00000533973 1582 ntBASIC14.28□□□□□ -0.12
NDUFA4O00483 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA4O00483 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA4O00483 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.28□□□□□ -0.12
NDUFA4O00483 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
NDUFA4O00483 AC010947.1-201ENST00000623454 693 ntBASIC14.28□□□□□ -0.12
NDUFA4O00483 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NDUFA4O00483 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
NDUFA4O00483 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.28□□□□□ -0.12
NDUFA4O00483 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
NDUFA4O00483 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA4O00483 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.27□□□□□ -0.12
NDUFA4O00483 AC005082.1-201ENST00000413042 2259 ntBASIC14.27□□□□□ -0.12
NDUFA4O00483 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA4O00483 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA4O00483 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA4O00483 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.27□□□□□ -0.12
NDUFA4O00483 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA4O00483 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA4O00483 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA4O00483 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA4O00483 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.27□□□□□ -0.12
NDUFA4O00483 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA4O00483 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA4O00483 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
NDUFA4O00483 MYLKP1-201ENST00000509077 1580 ntBASIC14.27□□□□□ -0.12
NDUFA4O00483 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
NDUFA4O00483 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NDUFA4O00483 CYP2D8P-201ENST00000433633 1490 ntBASIC14.27□□□□□ -0.12
NDUFA4O00483 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
NDUFA4O00483 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.27□□□□□ -0.13
NDUFA4O00483 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NDUFA4O00483 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.27□□□□□ -0.13
NDUFA4O00483 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.27□□□□□ -0.13
NDUFA4O00483 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.27□□□□□ -0.13
NDUFA4O00483 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NDUFA4O00483 CR769767.2-201ENST00000622735 460 ntBASIC14.27□□□□□ -0.13
NDUFA4O00483 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NDUFA4O00483 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
NDUFA4O00483 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.27□□□□□ -0.13
NDUFA4O00483 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NDUFA4O00483 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NDUFA4O00483 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.26□□□□□ -0.13
NDUFA4O00483 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
NDUFA4O00483 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
NDUFA4O00483 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NDUFA4O00483 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms