Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM49BA6NDI0 AC112777.1-201ENST00000540175 1423 ntBASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 AC079598.2-202ENST00000546624 1451 ntBASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM49BA6NDI0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 MIR4674-201ENST00000582457 87 ntBASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 AC026471.5-201ENST00000615068 467 ntBASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TRIM49BA6NDI0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM49BA6NDI0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.52■□□□□ 0.87
TRIM49BA6NDI0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 CRYGFP-201ENST00000418459 633 ntBASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRIM49BA6NDI0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TRIM49BA6NDI0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms