Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AL163051.1-201ENST00000569214 1512 ntBASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMIM28A0A1B0GU29 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.93■□□□□ 0.78
SMIM28A0A1B0GU29 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 AC009065.1-201ENST00000564055 1225 ntBASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 RNF126P1-202ENST00000569893 925 ntBASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMIM28A0A1B0GU29 AC093525.10-201ENST00000625130 1569 ntBASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 AC016734.2-201ENST00000624325 1377 ntBASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMIM28A0A1B0GU29 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SMIM28A0A1B0GU29 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms