Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 REXO1L9P-201ENST00000604264 2108 ntBASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 MYC-208ENST00000641036 567 ntBASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CAPN6Q9Y6Q1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CAPN6Q9Y6Q1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.77■□□□□ 0.75
CAPN6Q9Y6Q1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.77■□□□□ 0.75
CAPN6Q9Y6Q1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.77■□□□□ 0.75
CAPN6Q9Y6Q1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 GNAS-203ENST00000306120 1878 ntBASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 AC104771.1-201ENST00000603335 964 ntBASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CAPN6Q9Y6Q1 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 AIRN-201ENST00000601203 4374 ntBASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 PRSS44-201ENST00000515154 1146 ntBASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CAPN6Q9Y6Q1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 AC139713.2-201ENST00000641328 2723 ntBASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.74■□□□□ 0.75
CAPN6Q9Y6Q1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms