Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00588Q9Y4M8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00588Q9Y4M8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00588Q9Y4M8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LINC00588Q9Y4M8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00588Q9Y4M8 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00588Q9Y4M8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC12.77□□□□□ -0.37
LINC00588Q9Y4M8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00588Q9Y4M8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.77□□□□□ -0.37
LINC00588Q9Y4M8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LINC00588Q9Y4M8 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LINC00588Q9Y4M8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 AL357033.4-201ENST00000617703 1807 ntBASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 AC120498.9-201ENST00000339021 3867 ntBASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 SPDYE13P-201ENST00000445314 798 ntBASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 AC093458.2-201ENST00000623150 629 ntBASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 AC079602.3-201ENST00000623931 403 ntBASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 Z98044.1-201ENST00000632503 1764 ntBASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC12.76□□□□□ -0.37
LINC00588Q9Y4M8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 AL645929.1-201ENST00000420084 975 ntBASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 AL136038.4-201ENST00000603606 1261 ntBASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LINC00588Q9Y4M8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 AL391807.1-203ENST00000604392 2365 ntBASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LINC00588Q9Y4M8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms