Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19■□□□□ 0.63
CHMP2BQ9UQN3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 HTR7P1-202ENST00000624664 4411 ntBASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 AL162741.1-201ENST00000565563 1558 ntBASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 NIFKP9-201ENST00000419265 221 ntBASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 PRSS44-201ENST00000515154 1146 ntBASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CHMP2BQ9UQN3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 ID1-201ENST00000376105 1233 ntBASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 AC110285.5-201ENST00000611501 352 ntBASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 KRT8P3-201ENST00000519669 1449 ntBASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CHMP2BQ9UQN3 AL357033.4-201ENST00000617703 1807 ntBASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 AC133681.1-201ENST00000465482 601 ntBASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 AC091390.4-202ENST00000476426 537 ntBASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 RPS2P4-201ENST00000476944 856 ntBASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 KRT18P6-201ENST00000555540 1265 ntBASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 AC067852.2-201ENST00000590513 2313 ntBASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP2BQ9UQN3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP2BQ9UQN3 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms