Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.66■□□□□ 0.74
PCDHGC3Q9UN70 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDHGC3Q9UN70 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PCDHGC3Q9UN70 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
PCDHGC3Q9UN70 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.64■□□□□ 0.74
PCDHGC3Q9UN70 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGC3Q9UN70 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGC3Q9UN70 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDHGC3Q9UN70 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 NEK4P2-201ENST00000580004 1012 ntBASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 AC112497.1-201ENST00000624824 639 ntBASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDHGC3Q9UN70 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 ECEL1P3-201ENST00000427961 737 ntBASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 AC009947.2-201ENST00000444014 672 ntBASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 AC104390.1-201ENST00000555663 520 ntBASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDHGC3Q9UN70 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGC3Q9UN70 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGC3Q9UN70 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms